Analysis of interatomic Contacts of Structural Units in PDB entry:
5A7Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A7Z entry

There is 1 chain in PDB entry 5A7Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG -4LEU 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5A7Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 14Right-handed alpha
Helix 2
2
A
27 38Right-handed alpha
Helix 3
3
A
96 100Right-handed 310
Helix 4
4
A
101 123Right-handed alpha
Helix 5
5
A
124 126Right-handed 310
Helix 6
6
A
167 173Right-handed alpha
Helix 7
7
A
190 201Right-handed alpha
Helix 8
8
A
221 236Right-handed alpha
Helix 9
9
A
238 246Right-handed alpha
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There are 3 sheets in PDB entry 5A7Z. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
58 75parallel
Strand 3
A
40 55anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
A
128 131parallel
Strand 3
A
89 93parallel
Strand 4
A
176 179parallel
Strand 5
A
155 158parallel
Strand 6
A
206 208parallel
Strand 7
A
164 165parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 182first strand
Strand 2
A
188 189anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il