Analysis of interatomic Contacts of Structural Units in PDB entry:
5A8I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A8I entry

There is 1 chain in PDB entry 5A8I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 97PHE 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 5A8I

There are 2 sheets in PDB entry 5A8I. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 120first strand
Strand 2
A
99 107anti-parallel
Strand 3
A
199 207anti-parallel
Strand 4
A
192 195anti-parallel
Strand 5
A
170 173anti-parallel
Strand 6
A
178 180anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
127 131parallel
Strand 3
A
150 155anti-parallel
Strand 4
A
158 163anti-parallel
Strand 5
A
185 187anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il