Analysis of interatomic Contacts of Structural Units in PDB entry:
5A95


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A95 entry

There are 3 chains in PDB entry 5A95 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 28LYS 364
B
 ASP 30LYS 364
C
 ASP 30ARG 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 5A95. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 34Right-handed 310
Helix 2
AA2
A
41 45Right-handed 310
Helix 3
AA3
A
75 82Right-handed alpha
Helix 4
AA4
A
86 97Right-handed alpha
Helix 5
AA5
A
107 115Right-handed alpha
Helix 6
AA6
A
115 134Right-handed alpha
Helix 7
AA7
A
147 150Right-handed 310
Helix 8
AA8
A
154 158Right-handed 310
Helix 9
AA9
A
160 175Right-handed alpha
Helix 10
AB1
A
201 220Right-handed alpha
Helix 11
AB2
A
229 234Right-handed alpha
Helix 12
AB3
A
236 240Right-handed 310
Helix 13
AB4
A
266 278Right-handed alpha
Helix 14
AB5
A
279 284Right-handed 310
Helix 15
AB6
A
311 324Right-handed alpha
Helix 16
AB7
A
349 364Right-handed alpha
Helix 17
AB8
B
30 34Right-handed 310
Helix 18
AB9
B
41 45Right-handed 310
Helix 19
AC1
B
75 82Right-handed alpha
Helix 20
AC2
B
86 97Right-handed alpha
Helix 21
AC3
B
107 115Right-handed alpha
Helix 22
AC4
B
115 134Right-handed alpha
Helix 23
AC5
B
147 150Right-handed 310
Helix 24
AC6
B
154 158Right-handed 310
Helix 25
AC7
B
160 175Right-handed alpha
Helix 26
AC8
B
201 220Right-handed alpha
Helix 27
AC9
B
229 234Right-handed alpha
Helix 28
AD1
B
236 241Right-handed 310
Helix 29
AD2
B
266 278Right-handed alpha
Helix 30
AD3
B
279 284Right-handed 310
Helix 31
AD4
B
311 324Right-handed alpha
Helix 32
AD5
B
349 364Right-handed alpha
Helix 33
AD6
C
30 34Right-handed 310
Helix 34
AD7
C
41 45Right-handed 310
Helix 35
AD8
C
75 82Right-handed alpha
Helix 36
AD9
C
86 97Right-handed alpha
Helix 37
AE1
C
107 115Right-handed alpha
Helix 38
AE2
C
115 134Right-handed alpha
Helix 39
AE3
C
147 150Right-handed 310
Helix 40
AE4
C
154 158Right-handed 310
Helix 41
AE5
C
160 175Right-handed alpha
Helix 42
AE6
C
201 218Right-handed alpha
Helix 43
AE7
C
229 234Right-handed alpha
Helix 44
AE8
C
236 241Right-handed 310
Helix 45
AE9
C
266 278Right-handed alpha
Helix 46
AF1
C
279 284Right-handed 310
Helix 47
AF2
C
311 324Right-handed alpha
Helix 48
AF3
C
349 365Right-handed alpha
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There are 9 sheets in PDB entry 5A95. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
57 59anti-parallel
Strand 3
A
65 66anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 72first strand
Strand 2
A
101 106parallel
Strand 3
A
136 141parallel
Strand 4
A
181 185parallel
Strand 5
A
224 227parallel
Strand 6
A
250 252parallel
Strand 7
A
287 289parallel
Strand 8
A
326 329parallel
Strand 9
A
69 72parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
144 146anti-parallel
Strand 3
A
189 190parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 54first strand
Strand 2
B
57 59anti-parallel
Strand 3
B
65 66anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 72first strand
Strand 2
B
101 106parallel
Strand 3
B
136 141parallel
Strand 4
B
181 185parallel
Strand 5
B
224 227parallel
Strand 6
B
250 252parallel
Strand 7
B
287 289parallel
Strand 8
B
326 329parallel
Strand 9
B
69 72parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 152first strand
Strand 2
B
144 146anti-parallel
Strand 3
B
189 190parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 54first strand
Strand 2
C
57 59anti-parallel
Strand 3
C
65 66anti-parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
69 72first strand
Strand 2
C
101 106parallel
Strand 3
C
136 141parallel
Strand 4
C
181 185parallel
Strand 5
C
224 227parallel
Strand 6
C
250 252parallel
Strand 7
C
287 289parallel
Strand 8
C
326 329parallel
Strand 9
C
69 72parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
151 152first strand
Strand 2
C
144 146anti-parallel
Strand 3
C
189 190parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il