Analysis of interatomic Contacts of Structural Units in PDB entry:
5A97


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A97 entry

There are 4 chains in PDB entry 5A97 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 485
B
 SER 0ILE 485
C
 PRO -3ILE 485
D
 SER 0SER 0
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are113 helices in PDB entry 5A97. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 25Right-handed alpha
Helix 2
2
A
43 53Right-handed alpha
Helix 3
3
A
55 72Right-handed alpha
Helix 4
4
A
76 85Right-handed alpha
Helix 5
5
A
85 100Right-handed alpha
Helix 6
6
A
102 110Right-handed alpha
Helix 7
7
A
111 116Right-handed alpha
Helix 8
8
A
121 140Right-handed alpha
Helix 9
9
A
144 148Right-handed 310
Helix 10
10
A
164 184Right-handed alpha
Helix 11
11
A
198 209Right-handed alpha
Helix 12
12
A
211 217Right-handed 310
Helix 13
13
A
232 246Right-handed alpha
Helix 14
14
A
247 267Right-handed alpha
Helix 15
15
A
268 271Right-handed 310
Helix 16
16
A
272 297Right-handed alpha
Helix 17
17
A
297 304Right-handed alpha
Helix 18
18
A
308 320Right-handed alpha
Helix 19
19
A
326 338Right-handed alpha
Helix 20
20
A
343 354Right-handed alpha
Helix 21
21
A
356 365Right-handed alpha
Helix 22
22
A
374 378Right-handed 310
Helix 23
23
A
387 396Right-handed alpha
Helix 24
24
A
402 409Right-handed 310
Helix 25
25
A
412 418Right-handed 310
Helix 26
26
A
422 426Right-handed 310
Helix 27
27
A
427 444Right-handed alpha
Helix 28
28
A
452 463Right-handed alpha
Helix 29
29
B
9 25Right-handed alpha
Helix 30
30
B
43 53Right-handed alpha
Helix 31
31
B
55 72Right-handed alpha
Helix 32
32
B
76 85Right-handed alpha
Helix 33
33
B
85 100Right-handed alpha
Helix 34
34
B
102 110Right-handed alpha
Helix 35
35
B
113 117Right-handed 310
Helix 36
36
B
121 140Right-handed alpha
Helix 37
37
B
144 148Right-handed 310
Helix 38
38
B
164 184Right-handed alpha
Helix 39
39
B
198 209Right-handed alpha
Helix 40
40
B
211 217Right-handed 310
Helix 41
41
B
232 246Right-handed alpha
Helix 42
42
B
247 267Right-handed alpha
Helix 43
43
B
268 271Right-handed 310
Helix 44
44
B
272 297Right-handed alpha
Helix 45
45
B
297 304Right-handed alpha
Helix 46
46
B
308 320Right-handed alpha
Helix 47
47
B
326 338Right-handed alpha
Helix 48
48
B
343 354Right-handed alpha
Helix 49
49
B
357 364Right-handed alpha
Helix 50
50
B
374 378Right-handed 310
Helix 51
51
B
387 396Right-handed alpha
Helix 52
52
B
402 409Right-handed 310
Helix 53
53
B
412 418Right-handed 310
Helix 54
54
B
422 426Right-handed 310
Helix 55
55
B
427 444Right-handed alpha
Helix 56
56
B
445 449Right-handed 310
Helix 57
57
B
452 463Right-handed alpha
Helix 58
58
C
9 25Right-handed alpha
Helix 59
59
C
43 53Right-handed alpha
Helix 60
60
C
55 72Right-handed alpha
Helix 61
61
C
76 85Right-handed alpha
Helix 62
62
C
85 100Right-handed alpha
Helix 63
63
C
102 110Right-handed alpha
Helix 64
64
C
111 116Right-handed alpha
Helix 65
65
C
121 140Right-handed alpha
Helix 66
66
C
144 148Right-handed 310
Helix 67
67
C
161 184Right-handed alpha
Helix 68
68
C
199 210Right-handed alpha
Helix 69
69
C
211 217Right-handed 310
Helix 70
70
C
232 246Right-handed alpha
Helix 71
71
C
247 267Right-handed alpha
Helix 72
72
C
268 270Right-handed 310
Helix 73
73
C
272 297Right-handed alpha
Helix 74
74
C
297 304Right-handed alpha
Helix 75
75
C
308 320Right-handed alpha
Helix 76
76
C
326 338Right-handed alpha
Helix 77
77
C
343 354Right-handed alpha
Helix 78
78
C
356 364Right-handed alpha
Helix 79
79
C
374 378Right-handed 310
Helix 80
80
C
387 396Right-handed alpha
Helix 81
81
C
402 409Right-handed 310
Helix 82
82
C
412 418Right-handed 310
Helix 83
83
C
422 426Right-handed 310
Helix 84
84
C
427 444Right-handed alpha
Helix 85
85
C
452 464Right-handed alpha
Helix 86
86
D
9 25Right-handed alpha
Helix 87
87
D
43 53Right-handed alpha
Helix 88
88
D
55 72Right-handed alpha
Helix 89
89
D
76 85Right-handed alpha
Helix 90
90
D
85 100Right-handed alpha
Helix 91
91
D
102 110Right-handed alpha
Helix 92
92
D
111 116Right-handed alpha
Helix 93
93
D
121 140Right-handed alpha
Helix 94
94
D
144 148Right-handed 310
Helix 95
95
D
161 184Right-handed alpha
Helix 96
96
D
198 209Right-handed alpha
Helix 97
97
D
211 217Right-handed 310
Helix 98
98
D
232 246Right-handed alpha
Helix 99
99
D
247 267Right-handed alpha
Helix 100
100
D
268 271Right-handed 310
Helix 101
101
D
272 297Right-handed alpha
Helix 102
102
D
297 304Right-handed alpha
Helix 103
103
D
308 320Right-handed alpha
Helix 104
104
D
326 338Right-handed alpha
Helix 105
105
D
343 354Right-handed alpha
Helix 106
106
D
356 364Right-handed alpha
Helix 107
107
D
374 378Right-handed 310
Helix 108
108
D
387 396Right-handed alpha
Helix 109
109
D
402 409Right-handed 310
Helix 110
110
D
412 418Right-handed 310
Helix 111
111
D
422 426Right-handed 310
Helix 112
112
D
427 444Right-handed alpha
Helix 113
113
D
452 463Right-handed alpha
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There are 4 sheets in PDB entry 5A97. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 159first strand
Strand 2
A
483 485parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 159first strand
Strand 2
B
483 485parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
157 159first strand
Strand 2
C
483 485parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
157 159first strand
Strand 2
D
483 485parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il