Analysis of interatomic Contacts of Structural Units in PDB entry:
5A99


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A99 entry

There is 1 chain in PDB entry 5A99 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2VAL 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5A99. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 26Right-handed alpha
Helix 2
2
A
62 66Right-handed 310
Helix 3
3
A
80 93Right-handed alpha
Helix 4
4
A
120 124Right-handed 310
Helix 5
5
A
147 151Right-handed 310
Helix 6
6
A
152 156Right-handed 310
Helix 7
7
A
204 211Right-handed alpha
Helix 8
8
A
224 232Right-handed alpha
Helix 9
9
A
232 237Right-handed alpha
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There are 2 sheets in PDB entry 5A99. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 161first strand
Strand 2
A
164 173anti-parallel
Strand 3
A
110 116anti-parallel
Strand 4
A
33 40anti-parallel
Strand 5
A
46 53anti-parallel
Strand 6
A
218 222anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 61first strand
Strand 2
A
184 190anti-parallel
Strand 3
A
125 129anti-parallel
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