Analysis of interatomic Contacts of Structural Units in PDB entry:
5A9H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5A9H entry

There is 1 chain in PDB entry 5A9H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 408ILE 601
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 5A9H

There are 8 sheets in PDB entry 5A9H. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 456first strand
Strand 2
A
413 420anti-parallel
Strand 3
A
486 494parallel
Strand 4
A
497 504anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 443first strand
Strand 2
A
426 431anti-parallel
Strand 3
A
461 470anti-parallel
Strand 4
A
473 482anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
544 545first strand
Strand 2
A
514 521anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
549 552first strand
Strand 2
A
514 521anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
595 599first strand
Strand 2
A
580 585anti-parallel
Strand 3
A
514 521parallel
Strand 4
A
544 545anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
595 599first strand
Strand 2
A
580 585anti-parallel
Strand 3
A
514 521parallel
Strand 4
A
549 552anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 539first strand
Strand 2
A
527 530anti-parallel
Strand 3
A
559 562anti-parallel
Strand 4
A
567 570anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
554 555first strand
Strand 2
A
574 575anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il