Analysis of interatomic Contacts of Structural Units in PDB entry:
5A9I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5A9I entry

There are 3 chains in PDB entry 5A9I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MSE 408	ILE 601
B	MSE 408	ILE 601
C	MSE 408	ILE 601

There are no helices in PDB entry 5A9I

There are 25 sheets in PDB entry 5A9I. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, BA, BB, BC, BD, BE, BF, BG, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	497	505	first strand
Strand 2	A	485	494	anti-parallel
Strand 3	A	413	420	parallel
Strand 4	A	451	456	anti-parallel
Strand 5	B	451	456	anti-parallel
Strand 6	B	413	420	anti-parallel
Strand 7	B	485	494	parallel
Strand 8	B	497	505	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	437	443	first strand
Strand 2	A	426	431	anti-parallel
Strand 3	A	461	470	anti-parallel
Strand 4	A	473	482	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	544	545	first strand
Strand 2	A	514	521	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	549	552	first strand
Strand 2	A	514	521	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	593	599	first strand
Strand 2	A	580	588	anti-parallel
Strand 3	A	514	521	parallel
Strand 4	A	544	545	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	593	599	first strand
Strand 2	A	580	588	anti-parallel
Strand 3	A	514	521	parallel
Strand 4	A	549	552	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	537	539	first strand
Strand 2	A	527	530	anti-parallel
Strand 3	A	559	562	anti-parallel
Strand 4	A	567	570	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	554	556	first strand
Strand 2	A	573	575	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	437	443	first strand
Strand 2	B	426	431	anti-parallel
Strand 3	B	461	470	anti-parallel
Strand 4	B	473	482	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	545	first strand
Strand 2	B	514	521	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	549	552	first strand
Strand 2	B	514	521	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	592	599	first strand
Strand 2	B	580	588	anti-parallel
Strand 3	B	514	521	parallel
Strand 4	B	544	545	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	592	599	first strand
Strand 2	B	580	588	anti-parallel
Strand 3	B	514	521	parallel
Strand 4	B	549	552	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	537	539	first strand
Strand 2	B	527	530	anti-parallel
Strand 3	B	559	562	anti-parallel
Strand 4	B	567	570	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	554	556	first strand
Strand 2	B	573	575	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	453	456	first strand
Strand 2	C	413	420	anti-parallel
Strand 3	C	485	494	parallel
Strand 4	C	497	505	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	437	444	first strand
Strand 2	C	425	431	anti-parallel
Strand 3	C	461	470	anti-parallel
Strand 4	C	473	475	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	437	444	first strand
Strand 2	C	425	431	anti-parallel
Strand 3	C	461	470	anti-parallel
Strand 4	C	479	482	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	475	first strand
Strand 2	C	461	470	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	544	545	first strand
Strand 2	C	514	521	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	549	552	first strand
Strand 2	C	514	521	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	592	599	first strand
Strand 2	C	580	588	anti-parallel
Strand 3	C	514	521	parallel
Strand 4	C	544	545	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	592	599	first strand
Strand 2	C	580	588	anti-parallel
Strand 3	C	514	521	parallel
Strand 4	C	549	552	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in CI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	537	539	first strand
Strand 2	C	527	530	anti-parallel
Strand 3	C	559	562	anti-parallel
Strand 4	C	567	570	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	554	556	first strand
Strand 2	C	573	575	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5A9I

Analysis of interatomic Contacts of Structural Units in PDB entry:
5A9I