Analysis of interatomic Contacts of Structural Units in PDB entry:
5AA6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AA6 entry

There are 6 chains in PDB entry 5AA6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 22ALA 616
B
 GLN 22ASP 617
C
 GLN 22ALA 616
D
 GLN 22ALA 616
E
 GLN 22ALA 616
F
 GLN 22ALA 616
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are156 helices in PDB entry 5AA6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 30Right-handed alpha
Helix 2
2
A
51 73Right-handed alpha
Helix 3
3
A
82 87Right-handed alpha
Helix 4
4
A
88 91Right-handed 310
Helix 5
5
A
107 121Right-handed alpha
Helix 6
6
A
122 127Right-handed alpha
Helix 7
7
A
169 185Right-handed alpha
Helix 8
8
A
189 193Right-handed 310
Helix 9
9
A
196 207Right-handed alpha
Helix 10
10
A
246 250Right-handed 310
Helix 11
11
A
276 286Right-handed alpha
Helix 12
12
A
303 314Right-handed alpha
Helix 13
13
A
317 331Right-handed alpha
Helix 14
14
A
332 336Right-handed 310
Helix 15
15
A
337 342Right-handed 310
Helix 16
16
A
352 363Right-handed alpha
Helix 17
17
A
364 366Right-handed 310
Helix 18
18
A
367 376Right-handed alpha
Helix 19
19
A
382 395Right-handed alpha
Helix 20
20
A
403 408Right-handed alpha
Helix 21
21
A
409 424Right-handed alpha
Helix 22
22
A
449 472Right-handed alpha
Helix 23
23
A
514 533Right-handed alpha
Helix 24
24
A
537 561Right-handed alpha
Helix 25
25
A
562 567Right-handed 310
Helix 26
26
B
23 30Right-handed alpha
Helix 27
27
B
51 73Right-handed alpha
Helix 28
28
B
82 87Right-handed alpha
Helix 29
29
B
88 91Right-handed 310
Helix 30
30
B
107 121Right-handed alpha
Helix 31
31
B
122 127Right-handed alpha
Helix 32
32
B
169 185Right-handed alpha
Helix 33
33
B
190 193Right-handed 310
Helix 34
34
B
196 208Right-handed alpha
Helix 35
35
B
246 250Right-handed 310
Helix 36
36
B
276 285Right-handed alpha
Helix 37
37
B
303 314Right-handed alpha
Helix 38
38
B
317 330Right-handed alpha
Helix 39
39
B
332 336Right-handed 310
Helix 40
40
B
337 342Right-handed 310
Helix 41
41
B
352 363Right-handed alpha
Helix 42
42
B
364 366Right-handed 310
Helix 43
43
B
367 376Right-handed alpha
Helix 44
44
B
382 395Right-handed alpha
Helix 45
45
B
403 408Right-handed alpha
Helix 46
46
B
409 425Right-handed alpha
Helix 47
47
B
449 467Right-handed alpha
Helix 48
48
B
467 472Right-handed alpha
Helix 49
49
B
514 533Right-handed alpha
Helix 50
50
B
537 561Right-handed alpha
Helix 51
51
B
562 567Right-handed 310
Helix 52
52
C
23 30Right-handed alpha
Helix 53
53
C
51 74Right-handed alpha
Helix 54
54
C
82 87Right-handed alpha
Helix 55
55
C
88 91Right-handed 310
Helix 56
56
C
107 121Right-handed alpha
Helix 57
57
C
122 127Right-handed alpha
Helix 58
58
C
169 185Right-handed alpha
Helix 59
59
C
190 193Right-handed 310
Helix 60
60
C
196 208Right-handed alpha
Helix 61
61
C
246 250Right-handed 310
Helix 62
62
C
276 285Right-handed alpha
Helix 63
63
C
303 314Right-handed alpha
Helix 64
64
C
317 330Right-handed alpha
Helix 65
65
C
332 336Right-handed 310
Helix 66
66
C
337 342Right-handed 310
Helix 67
67
C
352 363Right-handed alpha
Helix 68
68
C
364 366Right-handed 310
Helix 69
69
C
367 376Right-handed alpha
Helix 70
70
C
382 395Right-handed alpha
Helix 71
71
C
403 408Right-handed alpha
Helix 72
72
C
409 422Right-handed alpha
Helix 73
73
C
449 467Right-handed alpha
Helix 74
74
C
467 472Right-handed alpha
Helix 75
75
C
514 533Right-handed alpha
Helix 76
76
C
537 561Right-handed alpha
Helix 77
77
C
562 567Right-handed 310
Helix 78
78
D
23 30Right-handed alpha
Helix 79
79
D
51 72Right-handed alpha
Helix 80
80
D
82 87Right-handed alpha
Helix 81
81
D
88 91Right-handed 310
Helix 82
82
D
107 121Right-handed alpha
Helix 83
83
D
122 128Right-handed alpha
Helix 84
84
D
169 185Right-handed alpha
Helix 85
85
D
189 193Right-handed 310
Helix 86
86
D
196 208Right-handed alpha
Helix 87
87
D
246 250Right-handed 310
Helix 88
88
D
276 285Right-handed alpha
Helix 89
89
D
303 314Right-handed alpha
Helix 90
90
D
317 330Right-handed alpha
Helix 91
91
D
331 336Right-handed 310
Helix 92
92
D
337 342Right-handed 310
Helix 93
93
D
352 363Right-handed alpha
Helix 94
94
D
364 366Right-handed 310
Helix 95
95
D
367 376Right-handed alpha
Helix 96
96
D
382 395Right-handed alpha
Helix 97
97
D
403 408Right-handed alpha
Helix 98
98
D
409 424Right-handed alpha
Helix 99
99
D
449 467Right-handed alpha
Helix 100
100
D
469 472Right-handed 310
Helix 101
101
D
494 498Right-handed 310
Helix 102
102
D
514 533Right-handed alpha
Helix 103
103
D
537 561Right-handed alpha
Helix 104
104
D
562 567Right-handed 310
Helix 105
105
E
23 30Right-handed alpha
Helix 106
106
E
51 74Right-handed alpha
Helix 107
107
E
82 87Right-handed alpha
Helix 108
108
E
88 91Right-handed 310
Helix 109
109
E
107 121Right-handed alpha
Helix 110
110
E
122 127Right-handed alpha
Helix 111
111
E
169 186Right-handed alpha
Helix 112
112
E
189 193Right-handed 310
Helix 113
113
E
196 208Right-handed alpha
Helix 114
114
E
246 250Right-handed 310
Helix 115
115
E
276 285Right-handed alpha
Helix 116
116
E
303 314Right-handed alpha
Helix 117
117
E
317 330Right-handed alpha
Helix 118
118
E
332 336Right-handed 310
Helix 119
119
E
337 342Right-handed 310
Helix 120
120
E
352 363Right-handed alpha
Helix 121
121
E
364 366Right-handed 310
Helix 122
122
E
367 376Right-handed alpha
Helix 123
123
E
382 395Right-handed alpha
Helix 124
124
E
403 408Right-handed alpha
Helix 125
125
E
409 424Right-handed alpha
Helix 126
126
E
449 467Right-handed alpha
Helix 127
127
E
467 472Right-handed alpha
Helix 128
128
E
514 533Right-handed alpha
Helix 129
129
E
537 561Right-handed alpha
Helix 130
130
E
562 567Right-handed 310
Helix 131
131
F
23 30Right-handed alpha
Helix 132
132
F
51 74Right-handed alpha
Helix 133
133
F
82 87Right-handed alpha
Helix 134
134
F
88 91Right-handed 310
Helix 135
135
F
107 121Right-handed alpha
Helix 136
136
F
122 127Right-handed alpha
Helix 137
137
F
169 185Right-handed alpha
Helix 138
138
F
190 193Right-handed 310
Helix 139
139
F
196 208Right-handed alpha
Helix 140
140
F
246 251Right-handed alpha
Helix 141
141
F
276 286Right-handed alpha
Helix 142
142
F
303 314Right-handed alpha
Helix 143
143
F
317 331Right-handed alpha
Helix 144
144
F
332 336Right-handed 310
Helix 145
145
F
337 342Right-handed 310
Helix 146
146
F
352 363Right-handed alpha
Helix 147
147
F
364 366Right-handed 310
Helix 148
148
F
367 376Right-handed alpha
Helix 149
149
F
382 395Right-handed alpha
Helix 150
150
F
403 408Right-handed alpha
Helix 151
151
F
409 425Right-handed alpha
Helix 152
152
F
449 467Right-handed alpha
Helix 153
153
F
467 472Right-handed alpha
Helix 154
154
F
514 533Right-handed alpha
Helix 155
155
F
537 561Right-handed alpha
Helix 156
156
F
562 567Right-handed 310
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There are 33 sheets in PDB entry 5AA6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, BG, CA, CB, CC, CD, A, DB, C, DD, DE, DF, G, EA, EB, EC, ED, FA, FB, FC, FD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
C
32 34anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 141first strand
Strand 2
F
345 346parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 255first strand
Strand 2
A
258 260anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 346first strand
Strand 2
F
140 141parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
479 481first strand
Strand 2
A
488 490anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 503first strand
Strand 2
A
509 511anti-parallel
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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 581first strand
Strand 2
A
587 591anti-parallel
Strand 3
A
595 598anti-parallel
Strand 4
A
601 604anti-parallel
Strand 5
A
614 615anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 34first strand
Strand 2
E
32 34anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 141first strand
Strand 2
C
345 346parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
253 255first strand
Strand 2
B
258 260anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 346first strand
Strand 2
C
140 141parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
479 481first strand
Strand 2
B
488 490anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
501 503first strand
Strand 2
B
509 511anti-parallel
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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
578 581first strand
Strand 2
B
587 590anti-parallel
Strand 3
B
595 598anti-parallel
Strand 4
B
601 604anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
253 255first strand
Strand 2
C
258 260anti-parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
479 481first strand
Strand 2
C
488 490anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
501 503first strand
Strand 2
C
509 511anti-parallel
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There are 4 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
578 581first strand
Strand 2
C
587 590anti-parallel
Strand 3
C
595 598anti-parallel
Strand 4
C
601 604anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 34first strand
Strand 2
F
32 34anti-parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
140 141first strand
Strand 2
E
345 346parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
253 255first strand
Strand 2
D
258 260anti-parallel
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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
345 346first strand
Strand 2
E
140 141parallel
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There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
479 481first strand
Strand 2
D
488 490anti-parallel
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There are 2 strands in DF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
501 503first strand
Strand 2
D
509 511anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
578 581first strand
Strand 2
D
587 591anti-parallel
Strand 3
D
595 598anti-parallel
Strand 4
D
601 604anti-parallel
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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
253 255first strand
Strand 2
E
258 260anti-parallel
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There are 2 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
479 481first strand
Strand 2
E
488 490anti-parallel
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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
501 503first strand
Strand 2
E
509 511anti-parallel
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There are 4 strands in ED sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
578 581first strand
Strand 2
E
587 590anti-parallel
Strand 3
E
595 598anti-parallel
Strand 4
E
601 604anti-parallel
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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
253 255first strand
Strand 2
F
258 260anti-parallel
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There are 2 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
479 481first strand
Strand 2
F
488 490anti-parallel
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There are 2 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
501 503first strand
Strand 2
F
509 511anti-parallel
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There are 4 strands in FD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
578 581first strand
Strand 2
F
587 591anti-parallel
Strand 3
F
595 598anti-parallel
Strand 4
F
601 604anti-parallel
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