Analysis of interatomic Contacts of Structural Units in PDB entry:
5AH5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AH5 entry

There are 4 chains in PDB entry 5AH5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 2HIS 817
B
 GLN 2HIS 817
C
 G 1 A 76
D
 G 1 A 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 5AH5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 20Right-handed alpha
Helix 2
2
A
47 67Right-handed alpha
Helix 3
3
A
81 92Right-handed alpha
Helix 4
4
A
94 113Right-handed alpha
Helix 5
5
A
118 122Right-handed 310
Helix 6
6
A
127 144Right-handed alpha
Helix 7
7
A
165 167Right-handed 310
Helix 8
8
A
193 195Right-handed 310
Helix 9
9
A
196 203Right-handed alpha
Helix 10
10
A
211 223Right-handed alpha
Helix 11
11
A
247 254Right-handed 310
Helix 12
12
A
263 268Right-handed 310
Helix 13
13
A
277 288Right-handed alpha
Helix 14
14
A
290 296Right-handed alpha
Helix 15
15
A
342 352Right-handed alpha
Helix 16
16
A
386 402Right-handed alpha
Helix 17
17
A
441 445Right-handed 310
Helix 18
18
A
461 464Right-handed 310
Helix 19
19
A
465 469Right-handed alpha
Helix 20
20
A
488 494Right-handed alpha
Helix 21
21
A
495 499Right-handed 310
Helix 22
22
A
510 518Right-handed alpha
Helix 23
23
A
526 530Right-handed 310
Helix 24
24
A
532 547Right-handed alpha
Helix 25
25
A
582 591Right-handed alpha
Helix 26
26
A
591 602Right-handed alpha
Helix 27
27
A
616 633Right-handed alpha
Helix 28
28
A
633 640Right-handed alpha
Helix 29
29
A
646 650Right-handed 310
Helix 30
30
A
652 675Right-handed alpha
Helix 31
31
A
677 695Right-handed alpha
Helix 32
32
A
700 716Right-handed alpha
Helix 33
33
A
719 730Right-handed alpha
Helix 34
34
A
735 739Right-handed 310
Helix 35
35
A
775 786Right-handed alpha
Helix 36
36
A
786 794Right-handed alpha
Helix 37
37
B
4 20Right-handed alpha
Helix 38
38
B
47 67Right-handed alpha
Helix 39
39
B
81 92Right-handed alpha
Helix 40
40
B
94 113Right-handed alpha
Helix 41
41
B
118 122Right-handed 310
Helix 42
42
B
127 144Right-handed alpha
Helix 43
43
B
165 167Right-handed 310
Helix 44
44
B
193 195Right-handed 310
Helix 45
45
B
196 203Right-handed alpha
Helix 46
46
B
204 207Right-handed 310
Helix 47
47
B
211 223Right-handed alpha
Helix 48
48
B
247 251Right-handed 310
Helix 49
49
B
276 288Right-handed alpha
Helix 50
50
B
341 349Right-handed alpha
Helix 51
51
B
387 401Right-handed alpha
Helix 52
52
B
441 445Right-handed 310
Helix 53
53
B
461 464Right-handed 310
Helix 54
54
B
465 469Right-handed alpha
Helix 55
55
B
488 493Right-handed alpha
Helix 56
56
B
494 499Right-handed 310
Helix 57
57
B
510 518Right-handed alpha
Helix 58
58
B
526 530Right-handed 310
Helix 59
59
B
532 547Right-handed alpha
Helix 60
60
B
574 578Right-handed 310
Helix 61
61
B
582 591Right-handed alpha
Helix 62
62
B
591 602Right-handed alpha
Helix 63
63
B
616 633Right-handed alpha
Helix 64
64
B
633 640Right-handed alpha
Helix 65
65
B
646 650Right-handed 310
Helix 66
66
B
652 675Right-handed alpha
Helix 67
67
B
677 696Right-handed alpha
Helix 68
68
B
700 716Right-handed alpha
Helix 69
69
B
719 730Right-handed alpha
Helix 70
70
B
735 739Right-handed 310
Helix 71
71
B
775 786Right-handed alpha
Helix 72
72
B
786 793Right-handed alpha
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There are 18 sheets in PDB entry 5AH5. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, BA, BB, BC, BD, BE, BF, BG, BH, BI,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
32 37parallel
Strand 3
A
520 524parallel
Strand 4
A
556 560parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 164first strand
Strand 2
A
147 157anti-parallel
Strand 3
A
182 191anti-parallel
Strand 4
A
415 416anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
173 174anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 245first strand
Strand 2
A
224 230anti-parallel
Strand 3
A
405 410anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 234first strand
Strand 2
A
301 310anti-parallel
Strand 3
A
315 322anti-parallel
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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
486 487anti-parallel
Strand 3
A
425 426anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 439first strand
Strand 2
A
429 432anti-parallel
Strand 3
A
479 482anti-parallel
Strand 4
A
470 472anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 566first strand
Strand 2
A
609 610parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
763 771first strand
Strand 2
A
753 760anti-parallel
Strand 3
A
808 813parallel
Strand 4
A
798 804anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
32 37parallel
Strand 3
B
520 524parallel
Strand 4
B
556 560parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 164first strand
Strand 2
B
147 157anti-parallel
Strand 3
B
182 191anti-parallel
Strand 4
B
415 416anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 170first strand
Strand 2
B
173 174anti-parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 245first strand
Strand 2
B
224 230anti-parallel
Strand 3
B
404 410anti-parallel
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There are 5 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 234first strand
Strand 2
B
301 310anti-parallel
Strand 3
B
315 322anti-parallel
Strand 4
B
257 259parallel
Strand 5
B
333 334anti-parallel
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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
418 419first strand
Strand 2
B
486 487anti-parallel
Strand 3
B
425 426anti-parallel
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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
436 439first strand
Strand 2
B
429 432anti-parallel
Strand 3
B
479 482anti-parallel
Strand 4
B
470 472anti-parallel
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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
565 566first strand
Strand 2
B
609 610parallel
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There are 4 strands in BI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
763 771first strand
Strand 2
B
753 760anti-parallel
Strand 3
B
808 813parallel
Strand 4
B
798 804anti-parallel
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