Analysis of interatomic Contacts of Structural Units in PDB entry:
5AHS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5AHS entry

There are 6 chains in PDB entry 5AHS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 2	TYR 392
B	TYR 2	TYR 392
C	TYR 2	TYR 392
D	GLU 3	TYR 392
E	TYR 2	TYR 392
F	TYR 2	TYR 392

There are105 helices in PDB entry 5AHS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	5	22	Right-handed alpha
Helix 2	2	A	23	25	Right-handed 310
Helix 3	3	A	26	34	Right-handed alpha
Helix 4	4	A	37	47	Right-handed alpha
Helix 5	5	A	55	59	Right-handed 310
Helix 6	6	A	64	79	Right-handed alpha
Helix 7	7	A	79	89	Right-handed alpha
Helix 8	8	A	92	101	Right-handed alpha
Helix 9	9	A	102	115	Right-handed alpha
Helix 10	10	A	131	135	Right-handed 310
Helix 11	11	A	231	240	Right-handed alpha
Helix 12	12	A	242	272	Right-handed alpha
Helix 13	13	A	282	308	Right-handed alpha
Helix 14	14	A	315	342	Right-handed alpha
Helix 15	15	A	342	347	Right-handed alpha
Helix 16	16	A	351	360	Right-handed alpha
Helix 17	17	A	361	364	Right-handed 310
Helix 18	18	A	368	381	Right-handed alpha
Helix 19	19	B	5	22	Right-handed alpha
Helix 20	20	B	23	25	Right-handed 310
Helix 21	21	B	26	34	Right-handed alpha
Helix 22	22	B	37	47	Right-handed alpha
Helix 23	23	B	55	59	Right-handed 310
Helix 24	24	B	64	79	Right-handed alpha
Helix 25	25	B	79	89	Right-handed alpha
Helix 26	26	B	92	101	Right-handed alpha
Helix 27	27	B	102	114	Right-handed alpha
Helix 28	28	B	131	135	Right-handed 310
Helix 29	29	B	234	272	Right-handed alpha
Helix 30	30	B	282	308	Right-handed alpha
Helix 31	31	B	315	341	Right-handed alpha
Helix 32	32	B	342	346	Right-handed 310
Helix 33	33	B	351	360	Right-handed alpha
Helix 34	34	B	361	364	Right-handed 310
Helix 35	35	B	368	381	Right-handed alpha
Helix 36	36	C	5	22	Right-handed alpha
Helix 37	37	C	23	25	Right-handed 310
Helix 38	38	C	26	34	Right-handed alpha
Helix 39	39	C	37	47	Right-handed alpha
Helix 40	40	C	55	59	Right-handed 310
Helix 41	41	C	64	79	Right-handed alpha
Helix 42	42	C	79	89	Right-handed alpha
Helix 43	43	C	92	101	Right-handed alpha
Helix 44	44	C	102	115	Right-handed alpha
Helix 45	45	C	131	135	Right-handed 310
Helix 46	46	C	231	241	Right-handed alpha
Helix 47	47	C	242	272	Right-handed alpha
Helix 48	48	C	282	308	Right-handed alpha
Helix 49	49	C	315	341	Right-handed alpha
Helix 50	50	C	342	347	Right-handed alpha
Helix 51	51	C	351	360	Right-handed alpha
Helix 52	52	C	361	364	Right-handed 310
Helix 53	53	C	368	381	Right-handed alpha
Helix 54	54	D	5	22	Right-handed alpha
Helix 55	55	D	23	25	Right-handed 310
Helix 56	56	D	26	34	Right-handed alpha
Helix 57	57	D	37	47	Right-handed alpha
Helix 58	58	D	55	59	Right-handed 310
Helix 59	59	D	64	79	Right-handed alpha
Helix 60	60	D	79	89	Right-handed alpha
Helix 61	61	D	92	101	Right-handed alpha
Helix 62	62	D	102	115	Right-handed alpha
Helix 63	63	D	131	135	Right-handed 310
Helix 64	64	D	234	272	Right-handed alpha
Helix 65	65	D	282	308	Right-handed alpha
Helix 66	66	D	315	342	Right-handed alpha
Helix 67	67	D	342	347	Right-handed alpha
Helix 68	68	D	351	360	Right-handed alpha
Helix 69	69	D	361	364	Right-handed 310
Helix 70	70	D	368	381	Right-handed alpha
Helix 71	71	E	5	22	Right-handed alpha
Helix 72	72	E	23	25	Right-handed 310
Helix 73	73	E	26	34	Right-handed alpha
Helix 74	74	E	37	47	Right-handed alpha
Helix 75	75	E	55	59	Right-handed 310
Helix 76	76	E	64	79	Right-handed alpha
Helix 77	77	E	79	89	Right-handed alpha
Helix 78	78	E	92	101	Right-handed alpha
Helix 79	79	E	102	114	Right-handed alpha
Helix 80	80	E	131	135	Right-handed 310
Helix 81	81	E	232	272	Right-handed alpha
Helix 82	82	E	282	308	Right-handed alpha
Helix 83	83	E	315	342	Right-handed alpha
Helix 84	84	E	343	346	Right-handed 310
Helix 85	85	E	351	360	Right-handed alpha
Helix 86	86	E	361	364	Right-handed 310
Helix 87	87	E	368	381	Right-handed alpha
Helix 88	88	F	5	22	Right-handed alpha
Helix 89	89	F	23	25	Right-handed 310
Helix 90	90	F	26	34	Right-handed alpha
Helix 91	91	F	37	47	Right-handed alpha
Helix 92	92	F	55	59	Right-handed 310
Helix 93	93	F	64	77	Right-handed alpha
Helix 94	94	F	79	89	Right-handed alpha
Helix 95	95	F	92	101	Right-handed alpha
Helix 96	96	F	102	114	Right-handed alpha
Helix 97	97	F	131	135	Right-handed 310
Helix 98	98	F	234	242	Right-handed alpha
Helix 99	99	F	242	272	Right-handed alpha
Helix 100	100	F	282	308	Right-handed alpha
Helix 101	101	F	315	341	Right-handed alpha
Helix 102	102	F	342	347	Right-handed alpha
Helix 103	103	F	351	360	Right-handed alpha
Helix 104	104	F	361	364	Right-handed 310
Helix 105	105	F	368	381	Right-handed alpha

There are 30 sheets in PDB entry 5AHS. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE, CA, CB, CC, CD, CE, A, DB, C, DD, DE, EA, EB, EC, ED, EE, FA, FB, FC, FD, FE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	122	first strand
Strand 2	A	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	185	first strand
Strand 2	A	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	199	first strand
Strand 2	A	210	221	anti-parallel
Strand 3	A	145	156	anti-parallel
Strand 4	A	138	142	anti-parallel
Strand 5	A	163	172	parallel
Strand 6	A	175	185	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	199	first strand
Strand 2	A	210	221	anti-parallel
Strand 3	A	145	156	anti-parallel
Strand 4	A	138	142	anti-parallel
Strand 5	A	163	172	parallel
Strand 6	A	120	122	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	274	first strand
Strand 2	A	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	122	first strand
Strand 2	B	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	185	first strand
Strand 2	B	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	194	199	first strand
Strand 2	B	210	221	anti-parallel
Strand 3	B	145	156	anti-parallel
Strand 4	B	138	142	anti-parallel
Strand 5	B	163	172	parallel
Strand 6	B	175	185	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	194	199	first strand
Strand 2	B	210	221	anti-parallel
Strand 3	B	145	156	anti-parallel
Strand 4	B	138	142	anti-parallel
Strand 5	B	163	172	parallel
Strand 6	B	120	122	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	274	first strand
Strand 2	B	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	122	first strand
Strand 2	C	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	185	first strand
Strand 2	C	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	194	199	first strand
Strand 2	C	210	221	anti-parallel
Strand 3	C	145	156	anti-parallel
Strand 4	C	138	142	anti-parallel
Strand 5	C	163	172	parallel
Strand 6	C	175	185	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	194	199	first strand
Strand 2	C	210	221	anti-parallel
Strand 3	C	145	156	anti-parallel
Strand 4	C	138	142	anti-parallel
Strand 5	C	163	172	parallel
Strand 6	C	120	122	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	274	first strand
Strand 2	C	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	120	122	first strand
Strand 2	D	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	175	185	first strand
Strand 2	D	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	194	199	first strand
Strand 2	D	210	221	anti-parallel
Strand 3	D	145	156	anti-parallel
Strand 4	D	138	142	anti-parallel
Strand 5	D	163	172	parallel
Strand 6	D	175	185	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	194	199	first strand
Strand 2	D	210	221	anti-parallel
Strand 3	D	145	156	anti-parallel
Strand 4	D	138	142	anti-parallel
Strand 5	D	163	172	parallel
Strand 6	D	120	122	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	273	274	first strand
Strand 2	D	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	122	first strand
Strand 2	E	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	175	185	first strand
Strand 2	E	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	194	199	first strand
Strand 2	E	210	221	anti-parallel
Strand 3	E	145	156	anti-parallel
Strand 4	E	138	142	anti-parallel
Strand 5	E	163	172	parallel
Strand 6	E	175	185	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in ED sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	194	199	first strand
Strand 2	E	210	221	anti-parallel
Strand 3	E	145	156	anti-parallel
Strand 4	E	138	142	anti-parallel
Strand 5	E	163	172	parallel
Strand 6	E	120	122	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in EE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	273	274	first strand
Strand 2	E	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	120	122	first strand
Strand 2	F	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	175	185	first strand
Strand 2	F	163	172	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in FC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	194	199	first strand
Strand 2	F	210	221	anti-parallel
Strand 3	F	145	156	anti-parallel
Strand 4	F	138	142	anti-parallel
Strand 5	F	163	172	parallel
Strand 6	F	175	185	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in FD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	194	199	first strand
Strand 2	F	210	221	anti-parallel
Strand 3	F	145	156	anti-parallel
Strand 4	F	138	142	anti-parallel
Strand 5	F	163	172	parallel
Strand 6	F	120	122	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in FE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	273	274	first strand
Strand 2	F	277	278	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5AHS

Analysis of interatomic Contacts of Structural Units in PDB entry:
5AHS