Analysis of interatomic Contacts of Structural Units in PDB entry:
5AHW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AHW entry

There are 6 chains in PDB entry 5AHW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2SER 147
B
 SER 2SER 147
C
 SER 2SER 147
D
 SER 2SER 147
E
 SER 2SER 147
F
 SER 2SER 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5AHW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 32Right-handed alpha
Helix 2
2
A
65 81Right-handed alpha
Helix 3
3
A
94 106Right-handed alpha
Helix 4
4
A
120 127Right-handed alpha
Helix 5
5
A
128 137Right-handed alpha
Helix 6
6
B
14 32Right-handed alpha
Helix 7
7
B
64 81Right-handed alpha
Helix 8
8
B
94 106Right-handed alpha
Helix 9
9
B
120 127Right-handed alpha
Helix 10
10
B
128 137Right-handed alpha
Helix 11
11
C
14 32Right-handed alpha
Helix 12
12
C
49 59Right-handed alpha
Helix 13
13
C
66 81Right-handed alpha
Helix 14
14
C
94 107Right-handed alpha
Helix 15
15
C
120 127Right-handed alpha
Helix 16
16
C
128 137Right-handed alpha
Helix 17
17
D
14 32Right-handed alpha
Helix 18
18
D
65 81Right-handed alpha
Helix 19
19
D
94 107Right-handed alpha
Helix 20
20
D
120 127Right-handed alpha
Helix 21
21
D
128 137Right-handed alpha
Helix 22
22
E
14 32Right-handed alpha
Helix 23
23
E
66 81Right-handed alpha
Helix 24
24
E
94 107Right-handed alpha
Helix 25
25
E
120 127Right-handed alpha
Helix 26
26
E
128 137Right-handed alpha
Helix 27
27
F
14 31Right-handed alpha
Helix 28
28
F
66 81Right-handed alpha
Helix 29
29
F
94 106Right-handed alpha
Helix 30
30
F
120 127Right-handed alpha
Helix 31
31
F
128 137Right-handed alpha
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There are 3 sheets in PDB entry 5AHW. Click on sheet of interest to get list of strands forming it: AA, CA, EA,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 92first strand
Strand 2
A
34 41parallel
Strand 3
A
6 10parallel
Strand 4
A
110 114parallel
Strand 5
A
140 144parallel
Strand 6
B
140 144anti-parallel
Strand 7
B
110 114parallel
Strand 8
B
6 10parallel
Strand 9
B
34 41parallel
Strand 10
B
86 92parallel
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There are 10 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
86 92first strand
Strand 2
C
34 41parallel
Strand 3
C
6 10parallel
Strand 4
C
110 114parallel
Strand 5
C
140 144parallel
Strand 6
D
140 144anti-parallel
Strand 7
D
110 114parallel
Strand 8
D
6 10parallel
Strand 9
D
34 41parallel
Strand 10
D
86 92parallel
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There are 10 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
86 92first strand
Strand 2
E
34 41parallel
Strand 3
E
6 10parallel
Strand 4
E
110 113parallel
Strand 5
E
140 143parallel
Strand 6
F
140 144anti-parallel
Strand 7
F
110 114parallel
Strand 8
F
6 10parallel
Strand 9
F
34 41parallel
Strand 10
F
86 92parallel
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