Analysis of interatomic Contacts of Structural Units in PDB entry:
5AID


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AID entry

There is 1 chain in PDB entry 5AID (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4LEU 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 5AID. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 23Right-handed 310
Helix 2
2
A
24 40Right-handed alpha
Helix 3
3
A
41 51Right-handed alpha
Helix 4
4
A
63 79Right-handed alpha
Helix 5
5
A
79 85Right-handed alpha
Helix 6
6
A
98 102Right-handed 310
Helix 7
7
A
115 136Right-handed alpha
Helix 8
8
A
143 158Right-handed alpha
Helix 9
9
A
158 167Right-handed alpha
Helix 10
10
A
183 188Right-handed alpha
Helix 11
11
A
188 194Right-handed alpha
Helix 12
12
A
221 242Right-handed alpha
Helix 13
13
A
248 277Right-handed alpha
Helix 14
14
A
282 298Right-handed alpha
Helix 15
15
A
307 323Right-handed alpha
Helix 16
16
A
324 328Right-handed 310
Helix 17
17
A
335 357Right-handed alpha
Helix 18
18
A
358 363Right-handed alpha
Helix 19
19
A
364 366Right-handed 310
Helix 20
20
A
372 376Right-handed 310
Helix 21
21
A
379 408Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5AID
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il