Analysis of interatomic Contacts of Structural Units in PDB entry:
5AIO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AIO entry

There is 1 chain in PDB entry 5AIO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 131MET 565
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5AIO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
132 142Right-handed alpha
Helix 2
2
A
145 149Right-handed 310
Helix 3
3
A
150 158Right-handed alpha
Helix 4
4
A
161 176Right-handed alpha
Helix 5
5
A
177 190Right-handed alpha
Helix 6
6
A
195 209Right-handed alpha
Helix 7
7
A
211 226Right-handed alpha
Helix 8
8
A
229 244Right-handed alpha
Helix 9
9
A
245 260Right-handed alpha
Helix 10
10
A
263 277Right-handed alpha
Helix 11
11
A
279 315Right-handed alpha
Helix 12
12
A
343 350Right-handed alpha
Helix 13
13
A
356 371Right-handed alpha
Helix 14
14
A
373 388Right-handed alpha
Helix 15
15
A
389 391Right-handed 310
Helix 16
16
A
395 400Right-handed 310
Helix 17
17
A
407 412Right-handed 310
Helix 18
18
A
413 419Right-handed alpha
Helix 19
19
A
431 444Right-handed alpha
Helix 20
20
A
447 456Right-handed alpha
Helix 21
21
A
457 459Right-handed 310
Helix 22
22
A
462 465Right-handed 310
Helix 23
23
A
466 480Right-handed alpha
Helix 24
24
A
482 491Right-handed alpha
Helix 25
25
A
492 496Right-handed 310
Helix 26
26
A
496 500Right-handed 310
Helix 27
27
A
501 515Right-handed alpha
Helix 28
28
A
517 531Right-handed alpha
Helix 29
29
A
535 549Right-handed alpha
Helix 30
30
A
551 564Right-handed alpha
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There are no sheets in PDB entry 5AIO
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il