Analysis of interatomic Contacts of Structural Units in PDB entry:
5AJJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AJJ entry

There are 2 chains in PDB entry 5AJJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 64SER 201
B
 ASP 81LEU 109
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5AJJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 70Right-handed alpha
Helix 2
2
A
72 97Right-handed alpha
Helix 3
3
A
98 119Right-handed alpha
Helix 4
4
A
119 133Right-handed alpha
Helix 5
5
A
136 151Right-handed alpha
Helix 6
6
A
154 170Right-handed alpha
Helix 7
7
A
173 189Right-handed alpha
Helix 8
8
A
190 201Right-handed alpha
Helix 9
9
B
81 101Right-handed alpha
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There are no sheets in PDB entry 5AJJ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il