Analysis of interatomic Contacts of Structural Units in PDB entry:
5ANR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ANR entry

There are 3 chains in PDB entry 5ANR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 1065GLU 1309
B
GLY 95SER 462
C
GLU 216PHE 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 5ANR. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1070 1078Right-handed alpha
Helix 2
2
A
1087 1100Right-handed alpha
Helix 3
3
A
1105 1115Right-handed alpha
Helix 4
4
A
1118 1120Right-handed 310
Helix 5
5
A
1121 1133Right-handed alpha
Helix 6
6
A
1137 1139Right-handed 310
Helix 7
7
A
1140 1152Right-handed alpha
Helix 8
8
A
1153 1173Right-handed alpha
Helix 9
9
A
1175 1179Right-handed 310
Helix 10
10
A
1182 1198Right-handed alpha
Helix 11
11
A
1199 1202Right-handed 310
Helix 12
12
A
1211 1223Right-handed alpha
Helix 13
13
A
1223 1240Right-handed alpha
Helix 14
14
A
1241 1244Right-handed 310
Helix 15
15
A
1251 1267Right-handed alpha
Helix 16
16
A
1271 1285Right-handed alpha
Helix 17
17
A
1288 1292Right-handed 310
Helix 18
18
A
1302 1307Right-handed alpha
Helix 19
19
B
97 102Right-handed 310
Helix 20
20
B
104 114Right-handed alpha
Helix 21
21
B
120 133Right-handed alpha
Helix 22
22
B
145 158Right-handed alpha
Helix 23
23
B
173 188Right-handed alpha
Helix 24
24
B
204 212Right-handed alpha
Helix 25
25
B
222 232Right-handed alpha
Helix 26
26
B
247 252Right-handed alpha
Helix 27
27
B
256 266Right-handed alpha
Helix 28
28
B
281 292Right-handed alpha
Helix 29
29
B
317 319Right-handed 310
Helix 30
30
B
320 329Right-handed alpha
Helix 31
31
B
343 357Right-handed alpha
Helix 32
32
B
369 382Right-handed alpha
Helix 33
33
B
414 423Right-handed alpha
Helix 34
34
B
439 441Right-handed 310
Helix 35
35
B
442 453Right-handed alpha
Helix 36
36
C
219 224Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 5ANR. Click on sheet of interest to get list of strands forming it: BA, BB,

There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
196 199first strand
Strand 2
B
218 221parallel
Strand 3
B
167 170parallel
Strand 4
B
242 246parallel
Strand 5
B
272 277parallel
Strand 6
B
136 139parallel
Strand 7
B
296 299parallel
Back to list of sheets
Back to top of page

There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
361 364first strand
Strand 2
B
387 390parallel
Strand 3
B
336 340parallel
Strand 4
B
403 408parallel
Strand 5
B
433 438parallel
Strand 6
B
310 315parallel
Strand 7
B
458 459parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il