Analysis of interatomic Contacts of Structural Units in PDB entry:
5AO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AO1 entry

There are 3 chains in PDB entry 5AO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 115ASP 583
B
 MET 115ASP 583
C
 MET 115LYS 486
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are110 helices in PDB entry 5AO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
129 137Right-handed alpha
Helix 2
2
A
138 143Right-handed alpha
Helix 3
3
A
144 147Right-handed 310
Helix 4
4
A
150 156Right-handed 310
Helix 5
5
A
163 186Right-handed alpha
Helix 6
6
A
187 190Right-handed 310
Helix 7
7
A
192 206Right-handed alpha
Helix 8
8
A
214 220Right-handed alpha
Helix 9
9
A
220 226Right-handed alpha
Helix 10
10
A
232 248Right-handed alpha
Helix 11
11
A
249 257Right-handed alpha
Helix 12
12
A
260 274Right-handed alpha
Helix 13
13
A
291 300Right-handed 310
Helix 14
14
A
309 324Right-handed alpha
Helix 15
15
A
330 338Right-handed alpha
Helix 16
16
A
355 373Right-handed alpha
Helix 17
17
A
376 395Right-handed alpha
Helix 18
18
A
402 404Right-handed 310
Helix 19
19
A
411 414Right-handed 310
Helix 20
20
A
415 421Right-handed alpha
Helix 21
21
A
424 433Right-handed alpha
Helix 22
22
A
435 437Right-handed 310
Helix 23
23
A
438 450Right-handed alpha
Helix 24
24
A
469 474Right-handed 310
Helix 25
25
A
475 482Right-handed alpha
Helix 26
26
A
494 496Right-handed 310
Helix 27
27
A
558 576Right-handed alpha
Helix 28
28
B
129 137Right-handed alpha
Helix 29
29
B
138 143Right-handed alpha
Helix 30
30
B
144 147Right-handed 310
Helix 31
31
B
150 156Right-handed 310
Helix 32
32
B
163 186Right-handed alpha
Helix 33
33
B
187 190Right-handed 310
Helix 34
34
B
192 206Right-handed alpha
Helix 35
35
B
214 220Right-handed alpha
Helix 36
36
B
220 226Right-handed alpha
Helix 37
37
B
232 249Right-handed alpha
Helix 38
38
B
249 257Right-handed alpha
Helix 39
39
B
260 274Right-handed alpha
Helix 40
40
B
291 300Right-handed 310
Helix 41
41
B
309 324Right-handed alpha
Helix 42
42
B
330 338Right-handed alpha
Helix 43
43
B
355 373Right-handed alpha
Helix 44
44
B
376 395Right-handed alpha
Helix 45
45
B
402 404Right-handed 310
Helix 46
46
B
411 414Right-handed 310
Helix 47
47
B
415 421Right-handed alpha
Helix 48
48
B
424 433Right-handed alpha
Helix 49
49
B
435 437Right-handed 310
Helix 50
50
B
438 450Right-handed alpha
Helix 51
51
B
469 473Right-handed 310
Helix 52
52
B
474 482Right-handed alpha
Helix 53
53
B
494 496Right-handed 310
Helix 54
54
B
513 518Right-handed 310
Helix 55
55
B
558 576Right-handed alpha
Helix 56
56
C
129 137Right-handed alpha
Helix 57
57
C
138 143Right-handed alpha
Helix 58
58
C
144 147Right-handed 310
Helix 59
59
C
150 156Right-handed 310
Helix 60
60
C
163 186Right-handed alpha
Helix 61
61
C
187 190Right-handed 310
Helix 62
62
C
192 206Right-handed alpha
Helix 63
63
C
214 220Right-handed alpha
Helix 64
64
C
220 226Right-handed alpha
Helix 65
65
C
232 248Right-handed alpha
Helix 66
66
C
249 257Right-handed alpha
Helix 67
67
C
260 274Right-handed alpha
Helix 68
68
C
291 300Right-handed 310
Helix 69
69
C
309 324Right-handed alpha
Helix 70
70
C
330 338Right-handed alpha
Helix 71
71
C
355 373Right-handed alpha
Helix 72
72
C
376 395Right-handed alpha
Helix 73
73
C
402 404Right-handed 310
Helix 74
74
C
411 414Right-handed 310
Helix 75
75
C
415 421Right-handed alpha
Helix 76
76
C
424 433Right-handed alpha
Helix 77
77
C
435 437Right-handed 310
Helix 78
78
C
438 451Right-handed alpha
Helix 79
79
C
469 473Right-handed 310
Helix 80
80
C
475 482Right-handed alpha
Helix 81
81
C
494 496Right-handed 310
Helix 82
82
C
558 575Right-handed alpha
Helix 83
83
D
129 137Right-handed alpha
Helix 84
84
D
138 143Right-handed alpha
Helix 85
85
D
144 147Right-handed 310
Helix 86
86
D
150 156Right-handed 310
Helix 87
87
D
163 186Right-handed alpha
Helix 88
88
D
187 190Right-handed 310
Helix 89
89
D
192 206Right-handed alpha
Helix 90
90
D
214 220Right-handed alpha
Helix 91
91
D
220 226Right-handed alpha
Helix 92
92
D
232 248Right-handed alpha
Helix 93
93
D
249 257Right-handed alpha
Helix 94
94
D
260 274Right-handed alpha
Helix 95
95
D
291 300Right-handed 310
Helix 96
96
D
309 324Right-handed alpha
Helix 97
97
D
330 338Right-handed alpha
Helix 98
98
D
355 373Right-handed alpha
Helix 99
99
D
376 394Right-handed alpha
Helix 100
100
D
402 404Right-handed 310
Helix 101
101
D
411 414Right-handed 310
Helix 102
102
D
415 420Right-handed alpha
Helix 103
103
D
424 433Right-handed alpha
Helix 104
104
D
435 437Right-handed 310
Helix 105
105
D
438 450Right-handed alpha
Helix 106
106
D
469 473Right-handed 310
Helix 107
107
D
475 482Right-handed alpha
Helix 108
108
D
494 496Right-handed 310
Helix 109
109
D
513 518Right-handed 310
Helix 110
110
D
558 576Right-handed alpha
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There are 16 sheets in PDB entry 5AO1. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD, CA, CB, CC, CD, A, DB, C, DD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 120first strand
Strand 2
A
124 128anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 343first strand
Strand 2
A
346 352anti-parallel
Strand 3
A
520 522parallel
Strand 4
A
525 529anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 400first strand
Strand 2
A
406 407anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 460first strand
Strand 2
A
548 554anti-parallel
Strand 3
A
498 504anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
124 128anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
339 343first strand
Strand 2
B
346 352anti-parallel
Strand 3
B
520 521parallel
Strand 4
B
529 530anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
399 400first strand
Strand 2
B
406 407anti-parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
455 460first strand
Strand 2
B
548 554anti-parallel
Strand 3
B
498 504anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
116 120first strand
Strand 2
C
124 128anti-parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
339 343first strand
Strand 2
C
346 352anti-parallel
Strand 3
C
520 521parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
399 400first strand
Strand 2
C
406 407anti-parallel
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There are 3 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
455 460first strand
Strand 2
C
548 554anti-parallel
Strand 3
C
498 504anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
116 120first strand
Strand 2
D
124 128anti-parallel
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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
339 343first strand
Strand 2
D
346 352anti-parallel
Strand 3
D
520 521parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
399 400first strand
Strand 2
D
406 407anti-parallel
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There are 3 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
455 460first strand
Strand 2
D
548 554anti-parallel
Strand 3
D
498 504anti-parallel
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