Analysis of interatomic Contacts of Structural Units in PDB entry:
5AOA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AOA entry

There is 1 chain in PDB entry 5AOA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6GLY 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5AOA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
59 62Right-handed 310
Helix 2
2
A
63 73Right-handed alpha
Helix 3
3
A
84 89Right-handed alpha
Helix 4
4
A
91 109Right-handed alpha
Helix 5
5
A
109 114Right-handed alpha
Helix 6
6
A
126 138Right-handed alpha
Helix 7
7
A
177 189Right-handed alpha
Helix 8
8
A
191 196Right-handed 310
Helix 9
9
A
196 201Right-handed 310
Helix 10
10
A
220 234Right-handed alpha
Helix 11
11
A
255 257Right-handed 310
Helix 12
12
A
258 275Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 5AOA.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 23first strand
Strand 2
A
26 33anti-parallel
Strand 3
A
76 80anti-parallel
Strand 4
A
44 50parallel
Strand 5
A
115 125parallel
Strand 6
A
156 160parallel
Strand 7
A
208 213parallel
Strand 8
A
238 243parallel
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