Analysis of interatomic Contacts of Structural Units in PDB entry:
5AOU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AOU entry

There are 2 chains in PDB entry 5AOU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1002LEU 2236
A
 ARG 2238GLY 2249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5AOU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1006 1018Right-handed alpha
Helix 2
2
A
1032 1044Right-handed alpha
Helix 3
3
A
2065 2074Right-handed alpha
Helix 4
4
A
2092 2101Right-handed alpha
Helix 5
5
A
2115 2126Right-handed alpha
Helix 6
6
A
2135 2137Right-handed 310
Helix 7
7
A
2138 2152Right-handed alpha
Helix 8
8
A
2162 2172Right-handed alpha
Helix 9
9
A
2190 2199Right-handed alpha
Helix 10
10
A
2215 2225Right-handed alpha
Helix 11
11
A
2233 2239Right-handed alpha
Helix 12
12
A
2241 2248Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 5AOU.

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1048 1052first strand
Strand 2
A
2230 2232parallel
Strand 3
A
2206 2211parallel
Strand 4
A
2176 2179parallel
Strand 5
A
2157 2160parallel
Strand 6
A
2129 2133parallel
Strand 7
A
2107 2110parallel
Strand 8
A
2079 2083parallel
Strand 9
A
1048 1052parallel
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