Analysis of interatomic Contacts of Structural Units in PDB entry:
5AOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AOY entry

There is 1 chain in PDB entry 5AOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 9ILE 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5AOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 26Right-handed alpha
Helix 2
2
A
34 39Right-handed alpha
Helix 3
3
A
96 115Right-handed alpha
Helix 4
4
A
116 119Right-handed 310
Helix 5
5
A
137 147Right-handed alpha
Helix 6
6
A
166 175Right-handed alpha
Helix 7
7
A
216 227Right-handed alpha
Helix 8
8
A
233 246Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 5AOY.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 87first strand
Strand 2
A
61 71anti-parallel
Strand 3
A
47 56anti-parallel
Strand 4
A
122 126parallel
Strand 5
A
150 154parallel
Strand 6
A
207 213anti-parallel
Strand 7
A
192 197anti-parallel
Strand 8
A
182 186anti-parallel
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