Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 5AOZ entry
There is 1 chain in PDB entry 5AOZ
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
|---|
A
|
PRO 399 | THR 539 |
Back to top of page
There are no helices in PDB entry
5AOZ
There are
3 sheets in PDB entry 5AOZ. Click on sheet of
interest to get list of strands forming it:
AA,
AB,
AC,
There are 5
strands in AA sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 447 |
451 | first strand |
| Strand 2 |
A
| 492 |
497 | anti-parallel |
| Strand 3 |
A
| 419 |
427 | anti-parallel |
| Strand 4 |
A
| 405 |
408 | anti-parallel |
| Strand 5 |
A
| 528 |
531 | parallel |
Back to list of sheets
Back to top of page
There are 6
strands in AB sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 412 |
414 | first strand |
| Strand 2 |
A
| 534 |
537 | parallel |
| Strand 3 |
A
| 505 |
518 | anti-parallel |
| Strand 4 |
A
| 435 |
442 | anti-parallel |
| Strand 5 |
A
| 470 |
474 | anti-parallel |
| Strand 6 |
A
| 463 |
465 | anti-parallel |
Back to list of sheets
Back to top of page
There are 2
strands in AC sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 454 |
455 | first strand |
| Strand 2 |
A
| 460 |
461 | anti-parallel |
Back to list of sheets
Back to top of page
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il