Analysis of interatomic Contacts of Structural Units in PDB entry:
5AWW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AWW entry

There are 3 chains in PDB entry 5AWW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
Y
 MET 1TYR 424
E
 MET 1ARG 60
G
 MET 1ARG 75
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 5AWW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
Y
1 11Right-handed alpha
Helix 2
AA2
Y
11 32Right-handed alpha
Helix 3
AA3
Y
40 49Right-handed alpha
Helix 4
AA4
Y
52 55Right-handed 310
Helix 5
AA5
Y
56 62Right-handed alpha
Helix 6
AA6
Y
65 70Right-handed alpha
Helix 7
AA7
Y
77 94Right-handed alpha
Helix 8
AA8
Y
94 102Right-handed alpha
Helix 9
AA9
Y
107 134Right-handed alpha
Helix 10
AB1
Y
136 141Right-handed alpha
Helix 11
AB2
Y
150 179Right-handed alpha
Helix 12
AB3
Y
182 194Right-handed alpha
Helix 13
AB4
Y
195 210Right-handed alpha
Helix 14
AB5
Y
213 237Right-handed alpha
Helix 15
AB6
Y
271 289Right-handed alpha
Helix 16
AB7
Y
294 304Right-handed alpha
Helix 17
AB8
Y
308 331Right-handed alpha
Helix 18
AB9
Y
332 343Right-handed alpha
Helix 19
AC1
Y
353 390Right-handed alpha
Helix 20
AC2
Y
393 396Right-handed 310
Helix 21
AC3
Y
397 424Right-handed alpha
Helix 22
AC4
E
2 18Right-handed alpha
Helix 23
AC5
E
23 60Right-handed alpha
Helix 24
AC6
G
2 26Right-handed alpha
Helix 25
AC7
G
49 73Right-handed alpha
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There are 2 sheets in PDB entry 5AWW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
238 244first strand
Strand 2
Y
259 265anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
248 250first strand
Strand 2
Y
253 255anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il