Analysis of interatomic Contacts of Structural Units in PDB entry:
5AYO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AYO entry

There is 1 chain in PDB entry 5AYO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4ARG 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 17 helices in PDB entry 5AYO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 39Right-handed alpha
Helix 2
AA2
A
42 66Right-handed alpha
Helix 3
AA3
A
72 103Right-handed alpha
Helix 4
AA4
A
109 138Right-handed alpha
Helix 5
AA5
A
147 177Right-handed alpha
Helix 6
AA6
A
186 199Right-handed alpha
Helix 7
AA7
A
200 214Right-handed alpha
Helix 8
AA8
A
240 242Right-handed 310
Helix 9
AA9
A
243 252Right-handed alpha
Helix 10
AB1
A
253 255Right-handed 310
Helix 11
AB2
A
262 272Right-handed alpha
Helix 12
AB3
A
276 303Right-handed alpha
Helix 13
AB4
A
306 332Right-handed alpha
Helix 14
AB5
A
335 366Right-handed alpha
Helix 15
AB6
A
370 394Right-handed alpha
Helix 16
AB7
A
398 401Right-handed 310
Helix 17
AB8
A
402 425Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5AYO
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il