Analysis of interatomic Contacts of Structural Units in PDB entry:
5AZ4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5AZ4 entry

There are 4 chains in PDB entry 5AZ4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 94	THR 819
B	VAL 94	THR 819
C	VAL 94	THR 819
D	VAL 94	THR 819

There are 37 helices in PDB entry 5AZ4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	235	239	Right-handed 310
Helix 2	AA2	A	312	321	Right-handed alpha
Helix 3	AA3	A	357	361	Right-handed 310
Helix 4	AA4	A	478	489	Right-handed alpha
Helix 5	AA5	A	502	517	Right-handed alpha
Helix 6	AA6	A	527	531	Right-handed 310
Helix 7	AA7	A	592	600	Right-handed alpha
Helix 8	AA8	A	601	603	Right-handed 310
Helix 9	AA9	A	749	753	Right-handed 310
Helix 10	AB1	B	235	239	Right-handed 310
Helix 11	AB2	B	312	321	Right-handed alpha
Helix 12	AB3	B	357	361	Right-handed 310
Helix 13	AB4	B	478	489	Right-handed alpha
Helix 14	AB5	B	502	517	Right-handed alpha
Helix 15	AB6	B	527	531	Right-handed 310
Helix 16	AB7	B	592	600	Right-handed alpha
Helix 17	AB8	B	601	603	Right-handed 310
Helix 18	AB9	B	749	753	Right-handed 310
Helix 19	AC1	B	783	787	Right-handed 310
Helix 20	AC2	C	235	239	Right-handed 310
Helix 21	AC3	C	312	321	Right-handed alpha
Helix 22	AC4	C	357	361	Right-handed 310
Helix 23	AC5	C	478	488	Right-handed alpha
Helix 24	AC6	C	502	517	Right-handed alpha
Helix 25	AC7	C	527	531	Right-handed 310
Helix 26	AC8	C	592	600	Right-handed alpha
Helix 27	AC9	C	601	603	Right-handed 310
Helix 28	AD1	C	749	753	Right-handed 310
Helix 29	AD2	D	235	239	Right-handed 310
Helix 30	AD3	D	312	321	Right-handed alpha
Helix 31	AD4	D	357	361	Right-handed 310
Helix 32	AD5	D	478	488	Right-handed alpha
Helix 33	AD6	D	502	517	Right-handed alpha
Helix 34	AD7	D	527	531	Right-handed 310
Helix 35	AD8	D	592	600	Right-handed alpha
Helix 36	AD9	D	601	603	Right-handed 310
Helix 37	AE1	D	749	753	Right-handed 310

There are 68 sheets in PDB entry 5AZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9, AH1, AH2, AH3, AH4, AH5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	115	first strand
Strand 2	A	103	106	anti-parallel
Strand 3	A	135	140	anti-parallel
Strand 4	A	155	156	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	115	first strand
Strand 2	A	103	106	anti-parallel
Strand 3	A	135	140	anti-parallel
Strand 4	A	770	776	anti-parallel
Strand 5	A	760	764	anti-parallel
Strand 6	A	754	755	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	122	first strand
Strand 2	A	128	130	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	165	first strand
Strand 2	A	746	747	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	698	701	first strand
Strand 2	A	711	716	anti-parallel
Strand 3	A	172	178	parallel
Strand 4	A	726	727	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	698	701	first strand
Strand 2	A	711	716	anti-parallel
Strand 3	A	172	178	parallel
Strand 4	A	734	740	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	191	first strand
Strand 2	A	619	630	anti-parallel
Strand 3	A	636	648	anti-parallel
Strand 4	A	654	661	anti-parallel
Strand 5	A	678	685	anti-parallel
Strand 6	A	691	695	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	201	202	first strand
Strand 2	A	207	208	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	221	first strand
Strand 2	A	227	230	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	498	500	first strand
Strand 2	A	442	447	parallel
Strand 3	A	254	258	anti-parallel
Strand 4	A	575	581	anti-parallel
Strand 5	A	604	606	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	265	first strand
Strand 2	A	346	350	anti-parallel
Strand 3	A	336	339	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	286	first strand
Strand 2	A	375	382	anti-parallel
Strand 3	A	387	391	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	310	first strand
Strand 2	A	294	300	anti-parallel
Strand 3	A	363	367	anti-parallel
Strand 4	A	436	439	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	404	first strand
Strand 2	A	428	432	parallel
Strand 3	A	415	419	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	539	first strand
Strand 2	A	545	549	anti-parallel
Strand 3	A	612	614	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	554	556	first strand
Strand 2	A	568	570	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	778	781	first strand
Strand 2	A	804	807	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	788	789	first strand
Strand 2	A	795	796	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	112	113	first strand
Strand 2	B	105	106	anti-parallel
Strand 3	B	135	136	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	121	122	first strand
Strand 2	B	128	129	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	138	140	first strand
Strand 2	B	770	776	anti-parallel
Strand 3	B	760	764	anti-parallel
Strand 4	B	754	755	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	165	first strand
Strand 2	B	746	747	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	698	701	first strand
Strand 2	B	711	716	anti-parallel
Strand 3	B	172	178	parallel
Strand 4	B	726	727	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	698	701	first strand
Strand 2	B	711	716	anti-parallel
Strand 3	B	172	178	parallel
Strand 4	B	734	740	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	191	first strand
Strand 2	B	619	630	anti-parallel
Strand 3	B	636	649	anti-parallel
Strand 4	B	653	661	anti-parallel
Strand 5	B	678	685	anti-parallel
Strand 6	B	691	695	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	218	221	first strand
Strand 2	B	227	230	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	498	500	first strand
Strand 2	B	442	447	parallel
Strand 3	B	254	258	anti-parallel
Strand 4	B	575	581	anti-parallel
Strand 5	B	604	606	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	262	265	first strand
Strand 2	B	346	350	anti-parallel
Strand 3	B	336	339	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	286	first strand
Strand 2	B	375	382	anti-parallel
Strand 3	B	387	391	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	303	310	first strand
Strand 2	B	294	300	anti-parallel
Strand 3	B	363	367	anti-parallel
Strand 4	B	436	439	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	402	404	first strand
Strand 2	B	428	433	parallel
Strand 3	B	413	419	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	535	539	first strand
Strand 2	B	545	549	anti-parallel
Strand 3	B	612	614	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	554	556	first strand
Strand 2	B	568	570	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	778	780	first strand
Strand 2	B	805	807	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	106	first strand
Strand 2	C	112	115	anti-parallel
Strand 3	C	794	795	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	122	first strand
Strand 2	C	128	130	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	138	first strand
Strand 2	C	155	156	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	142	first strand
Strand 2	C	147	148	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	165	first strand
Strand 2	C	746	747	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	698	701	first strand
Strand 2	C	711	716	anti-parallel
Strand 3	C	172	178	parallel
Strand 4	C	726	727	parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	698	701	first strand
Strand 2	C	711	716	anti-parallel
Strand 3	C	172	178	parallel
Strand 4	C	734	740	anti-parallel

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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	191	first strand
Strand 2	C	619	630	anti-parallel
Strand 3	C	636	648	anti-parallel
Strand 4	C	654	661	anti-parallel
Strand 5	C	678	685	anti-parallel
Strand 6	C	691	695	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	218	221	first strand
Strand 2	C	227	230	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	498	500	first strand
Strand 2	C	442	447	parallel
Strand 3	C	254	258	anti-parallel
Strand 4	C	575	581	anti-parallel
Strand 5	C	604	606	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	265	first strand
Strand 2	C	346	350	anti-parallel
Strand 3	C	336	339	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	286	first strand
Strand 2	C	375	382	anti-parallel
Strand 3	C	387	391	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	303	310	first strand
Strand 2	C	294	300	anti-parallel
Strand 3	C	363	367	anti-parallel
Strand 4	C	436	439	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	402	404	first strand
Strand 2	C	428	432	parallel
Strand 3	C	415	419	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	535	539	first strand
Strand 2	C	545	549	anti-parallel
Strand 3	C	612	614	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	554	556	first strand
Strand 2	C	568	570	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	754	755	first strand
Strand 2	C	760	764	anti-parallel
Strand 3	C	770	775	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	779	780	first strand
Strand 2	C	805	806	anti-parallel

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There are 5 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	155	156	first strand
Strand 2	D	135	140	anti-parallel
Strand 3	D	770	776	anti-parallel
Strand 4	D	760	764	anti-parallel
Strand 5	D	754	755	anti-parallel

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There are 5 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	155	156	first strand
Strand 2	D	135	140	anti-parallel
Strand 3	D	104	106	anti-parallel
Strand 4	D	112	115	anti-parallel
Strand 5	D	794	795	anti-parallel

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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	121	122	first strand
Strand 2	D	128	129	anti-parallel

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There are 2 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	164	165	first strand
Strand 2	D	746	747	anti-parallel

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There are 4 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	698	701	first strand
Strand 2	D	711	716	anti-parallel
Strand 3	D	172	178	parallel
Strand 4	D	726	727	parallel

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There are 4 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	698	701	first strand
Strand 2	D	711	716	anti-parallel
Strand 3	D	172	178	parallel
Strand 4	D	734	740	anti-parallel

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There are 6 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	191	first strand
Strand 2	D	619	630	anti-parallel
Strand 3	D	636	649	anti-parallel
Strand 4	D	653	661	anti-parallel
Strand 5	D	678	685	anti-parallel
Strand 6	D	691	695	anti-parallel

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There are 2 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	218	221	first strand
Strand 2	D	227	230	anti-parallel

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There are 5 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	498	500	first strand
Strand 2	D	442	447	parallel
Strand 3	D	254	258	anti-parallel
Strand 4	D	575	581	anti-parallel
Strand 5	D	604	606	anti-parallel

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There are 3 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	265	first strand
Strand 2	D	346	350	anti-parallel
Strand 3	D	336	339	anti-parallel

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There are 3 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	282	286	first strand
Strand 2	D	375	382	anti-parallel
Strand 3	D	387	391	anti-parallel

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There are 4 strands in AH1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	303	310	first strand
Strand 2	D	294	300	anti-parallel
Strand 3	D	363	367	anti-parallel
Strand 4	D	436	439	anti-parallel

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There are 3 strands in AH2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	402	404	first strand
Strand 2	D	428	432	parallel
Strand 3	D	415	419	anti-parallel

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There are 3 strands in AH3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	535	539	first strand
Strand 2	D	545	549	anti-parallel
Strand 3	D	612	614	anti-parallel

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There are 2 strands in AH4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	554	556	first strand
Strand 2	D	568	570	anti-parallel

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There are 2 strands in AH5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	778	780	first strand
Strand 2	D	805	807	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5AZ4

Analysis of interatomic Contacts of Structural Units in PDB entry:
5AZ4