Analysis of interatomic Contacts of Structural Units in PDB entry:
5AZ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AZ9 entry

There is 1 chain in PDB entry 5AZ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2LEU 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5AZ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 33Right-handed alpha
Helix 2
AA2
A
43 48Right-handed alpha
Helix 3
AA3
A
62 69Right-handed alpha
Helix 4
AA4
A
78 83Right-handed alpha
Helix 5
AA5
A
86 91Right-handed alpha
Helix 6
AA6
A
124 126Right-handed 310
Helix 7
AA7
A
127 137Right-handed alpha
Helix 8
AA8
A
149 159Right-handed alpha
Helix 9
AA9
A
181 197Right-handed alpha
Helix 10
AB1
A
205 215Right-handed alpha
Helix 11
AB2
A
224 226Right-handed 310
Helix 12
AB3
A
227 235Right-handed alpha
Helix 13
AB4
A
268 279Right-handed alpha
Helix 14
AB5
A
282 293Right-handed alpha
Helix 15
AB6
A
300 308Right-handed alpha
Helix 16
AB7
A
310 323Right-handed alpha
Helix 17
AB8
A
331 348Right-handed alpha
Helix 18
AB9
A
352 383Right-handed alpha
Helix 19
AC1
A
393 404Right-handed alpha
Helix 20
AC2
A
407 417Right-handed alpha
Helix 21
AC3
A
419 430Right-handed alpha
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There are 6 sheets in PDB entry 5AZ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
8 11parallel
Strand 3
A
55 59parallel
Strand 4
A
254 262anti-parallel
Strand 5
A
102 107anti-parallel
Strand 6
A
297 298anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
8 11parallel
Strand 3
A
55 59parallel
Strand 4
A
254 262anti-parallel
Strand 5
A
324 325parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
98 99anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
218 223parallel
Strand 3
A
110 114anti-parallel
Strand 4
A
238 241anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 168first strand
Strand 2
A
171 178anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
249 250anti-parallel
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