Analysis of interatomic Contacts of Structural Units in PDB entry:
5AZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AZA entry

There is 1 chain in PDB entry 5AZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1SER 861
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5AZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 32Right-handed alpha
Helix 2
AA2
A
42 53Right-handed alpha
Helix 3
AA3
A
66 73Right-handed alpha
Helix 4
AA4
A
82 87Right-handed alpha
Helix 5
AA5
A
88 89Right-handed 310
Helix 6
AA6
A
90 91Right-handed 310
Helix 7
AA7
A
92 97Right-handed alpha
Helix 8
AA8
A
128 130Right-handed 310
Helix 9
AA9
A
131 141Right-handed alpha
Helix 10
AB1
A
153 162Right-handed alpha
Helix 11
AB2
A
185 201Right-handed alpha
Helix 12
AB3
A
209 219Right-handed alpha
Helix 13
AB4
A
228 230Right-handed 310
Helix 14
AB5
A
231 239Right-handed alpha
Helix 15
AB6
A
272 283Right-handed alpha
Helix 16
AB7
A
286 297Right-handed alpha
Helix 17
AB8
A
304 312Right-handed alpha
Helix 18
AB9
A
314 326Right-handed alpha
Helix 19
AC1
A
335 353Right-handed alpha
Helix 20
AC2
A
356 400Right-handed alpha
Helix 21
AC3
A
436 446Right-handed alpha
Helix 22
AC4
A
448 452Right-handed 310
Helix 23
AC5
A
468 471Right-handed 310
Helix 24
AC6
A
472 480Right-handed alpha
Helix 25
AC7
A
484 490Right-handed alpha
Helix 26
AC8
A
579 581Right-handed 310
Helix 27
AC9
A
583 591Right-handed alpha
Helix 28
AD1
A
599 607Right-handed alpha
Helix 29
AD2
A
819 833Right-handed alpha
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There are 11 sheets in PDB entry 5AZA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
7 10parallel
Strand 3
A
59 63parallel
Strand 4
A
258 266anti-parallel
Strand 5
A
106 111anti-parallel
Strand 6
A
301 302anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
7 10parallel
Strand 3
A
59 63parallel
Strand 4
A
258 266anti-parallel
Strand 5
A
328 329parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
102 103anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 227first strand
Strand 2
A
114 118anti-parallel
Strand 3
A
242 245anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
176 178anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 407first strand
Strand 2
A
462 466parallel
Strand 3
A
617 622anti-parallel
Strand 4
A
608 614anti-parallel
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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
549 551first strand
Strand 2
A
540 543anti-parallel
Strand 3
A
564 568parallel
Strand 4
A
572 577anti-parallel
Strand 5
A
501 507anti-parallel
Strand 6
A
510 513anti-parallel
Strand 7
A
518 521anti-parallel
Strand 8
A
528 531anti-parallel
Strand 9
A
534 537anti-parallel
Strand 10
A
555 556anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
637 641first strand
Strand 2
A
625 634anti-parallel
Strand 3
A
647 657anti-parallel
Strand 4
A
697 703anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
676 689first strand
Strand 2
A
662 673anti-parallel
Strand 3
A
708 719anti-parallel
Strand 4
A
836 859anti-parallel
Strand 5
A
757 772anti-parallel
Strand 6
A
785 803anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
721 722first strand
Strand 2
A
744 753anti-parallel
Strand 3
A
727 728anti-parallel
Strand 4
A
731 732anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
721 722first strand
Strand 2
A
744 753anti-parallel
Strand 3
A
806 815anti-parallel
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