Analysis of interatomic Contacts of Structural Units in PDB entry:
5AZT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AZT entry

There are 3 chains in PDB entry 5AZT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 204TYR 468
B
 LYS 204ASP 466
C
 ARG 686GLU 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5AZT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
204 218Right-handed alpha
Helix 2
AA2
A
221 229Right-handed alpha
Helix 3
AA3
A
243 253Right-handed alpha
Helix 4
AA4
A
253 260Right-handed alpha
Helix 5
AA5
A
267 294Right-handed alpha
Helix 6
AA6
A
301 322Right-handed alpha
Helix 7
AA7
A
341 347Right-handed alpha
Helix 8
AA8
A
350 353Right-handed 310
Helix 9
AA9
A
354 367Right-handed alpha
Helix 10
AB1
A
371 384Right-handed alpha
Helix 11
AB2
A
393 416Right-handed alpha
Helix 12
AB3
A
421 451Right-handed alpha
Helix 13
AB4
A
457 465Right-handed alpha
Helix 14
AB5
B
205 218Right-handed alpha
Helix 15
AB6
B
221 231Right-handed alpha
Helix 16
AB7
B
243 254Right-handed alpha
Helix 17
AB8
B
267 294Right-handed alpha
Helix 18
AB9
B
296 300Right-handed 310
Helix 19
AC1
B
301 322Right-handed alpha
Helix 20
AC2
B
341 347Right-handed alpha
Helix 21
AC3
B
350 353Right-handed 310
Helix 22
AC4
B
354 367Right-handed alpha
Helix 23
AC5
B
371 384Right-handed alpha
Helix 24
AC6
B
393 416Right-handed alpha
Helix 25
AC7
B
421 451Right-handed alpha
Helix 26
AC8
B
457 465Right-handed alpha
Helix 27
AC9
C
687 696Right-handed alpha
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There are 2 sheets in PDB entry 5AZT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 241first strand
Strand 2
A
337 340parallel
Strand 3
A
329 332anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 241first strand
Strand 2
B
337 340parallel
Strand 3
B
329 332anti-parallel
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