Analysis of interatomic Contacts of Structural Units in PDB entry:
5B0W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5B0W entry

There are 3 chains in PDB entry 5B0W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 18	ILE 278
B	GLU 18	SER 277
D	GLU 18	GLY 276

There are 65 helices in PDB entry 5B0W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	30	Right-handed alpha
Helix 2	AA2	A	31	57	Right-handed alpha
Helix 3	AA3	A	61	87	Right-handed alpha
Helix 4	AA4	A	121	143	Right-handed alpha
Helix 5	AA5	A	145	169	Right-handed alpha
Helix 6	AA6	A	172	206	Right-handed alpha
Helix 7	AA7	A	207	232	Right-handed alpha
Helix 8	AA8	A	240	256	Right-handed alpha
Helix 9	AA9	A	256	268	Right-handed alpha
Helix 10	AB1	B	20	30	Right-handed alpha
Helix 11	AB2	B	31	56	Right-handed alpha
Helix 12	AB3	B	57	59	Right-handed 310
Helix 13	AB4	B	61	87	Right-handed alpha
Helix 14	AB5	B	121	143	Right-handed alpha
Helix 15	AB6	B	145	169	Right-handed alpha
Helix 16	AB7	B	172	196	Right-handed alpha
Helix 17	AB8	B	196	205	Right-handed alpha
Helix 18	AB9	B	207	232	Right-handed alpha
Helix 19	AC1	B	240	256	Right-handed alpha
Helix 20	AC2	B	256	275	Right-handed alpha
Helix 21	AC3	D	20	30	Right-handed alpha
Helix 22	AC4	D	31	56	Right-handed alpha
Helix 23	AC5	D	57	59	Right-handed 310
Helix 24	AC6	D	61	87	Right-handed alpha
Helix 25	AC7	D	121	142	Right-handed alpha
Helix 26	AC8	D	145	169	Right-handed alpha
Helix 27	AC9	D	172	197	Right-handed alpha
Helix 28	AD1	D	197	206	Right-handed alpha
Helix 29	AD2	D	207	232	Right-handed alpha
Helix 30	AD3	D	240	256	Right-handed alpha
Helix 31	AD4	D	256	268	Right-handed alpha
Helix 32	AD5	D	270	275	Right-handed alpha
Helix 33	AD6	E	20	29	Right-handed alpha
Helix 34	AD7	E	31	56	Right-handed alpha
Helix 35	AD8	E	61	87	Right-handed alpha
Helix 36	AD9	E	122	142	Right-handed alpha
Helix 37	AE1	E	145	169	Right-handed alpha
Helix 38	AE2	E	172	196	Right-handed alpha
Helix 39	AE3	E	196	206	Right-handed alpha
Helix 40	AE4	E	207	232	Right-handed alpha
Helix 41	AE5	E	240	256	Right-handed alpha
Helix 42	AE6	E	256	270	Right-handed alpha
Helix 43	AE7	E	270	275	Right-handed alpha
Helix 44	AE8	F	20	29	Right-handed alpha
Helix 45	AE9	F	31	56	Right-handed alpha
Helix 46	AF1	F	61	87	Right-handed alpha
Helix 47	AF2	F	121	142	Right-handed alpha
Helix 48	AF3	F	145	169	Right-handed alpha
Helix 49	AF4	F	172	196	Right-handed alpha
Helix 50	AF5	F	196	205	Right-handed alpha
Helix 51	AF6	F	207	232	Right-handed alpha
Helix 52	AF7	F	240	256	Right-handed alpha
Helix 53	AF8	F	256	270	Right-handed alpha
Helix 54	AF9	F	270	276	Right-handed alpha
Helix 55	AG1	G	20	29	Right-handed alpha
Helix 56	AG2	G	31	56	Right-handed alpha
Helix 57	AG3	G	61	87	Right-handed alpha
Helix 58	AG4	G	122	142	Right-handed alpha
Helix 59	AG5	G	145	169	Right-handed alpha
Helix 60	AG6	G	172	196	Right-handed alpha
Helix 61	AG7	G	196	205	Right-handed alpha
Helix 62	AG8	G	207	232	Right-handed alpha
Helix 63	AG9	G	240	256	Right-handed alpha
Helix 64	AH1	G	256	270	Right-handed alpha
Helix 65	AH2	G	270	275	Right-handed alpha

There are 8 sheets in PDB entry 5B0W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	94	first strand
Strand 2	A	117	119	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	94	first strand
Strand 2	B	117	119	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	94	first strand
Strand 2	D	117	119	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	106	109	first strand
Strand 2	D	112	115	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	92	94	first strand
Strand 2	E	117	119	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	92	94	first strand
Strand 2	F	117	119	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	92	94	first strand
Strand 2	G	117	119	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	106	109	first strand
Strand 2	G	112	115	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5B0W

Analysis of interatomic Contacts of Structural Units in PDB entry:
5B0W