Analysis of interatomic Contacts of Structural Units in PDB entry:
5B1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5B1H entry

There are 8 chains in PDB entry 5B1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 41
A
 ASP 43LYS 303
B
 MET 1ILE 41
B
 ASP 43LYS 303
C
 MET 1ILE 41
C
 ASP 43LYS 303
D
 MET 1ILE 41
D
 ASP 43LYS 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 5B1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 10Right-handed 310
Helix 2
AA2
A
22 26Right-handed 310
Helix 3
AA3
A
34 36Right-handed 310
Helix 4
AA4
A
41 56Right-handed alpha
Helix 5
AA5
A
71 84Right-handed alpha
Helix 6
AA6
A
97 107Right-handed alpha
Helix 7
AA7
A
115 117Right-handed 310
Helix 8
AA8
A
118 133Right-handed alpha
Helix 9
AA9
A
146 154Right-handed alpha
Helix 10
AB1
A
155 164Right-handed alpha
Helix 11
AB2
A
178 192Right-handed alpha
Helix 12
AB3
A
205 209Right-handed 310
Helix 13
AB4
A
226 232Right-handed 310
Helix 14
AB5
A
241 257Right-handed alpha
Helix 15
AB6
A
261 276Right-handed alpha
Helix 16
AB7
A
292 299Right-handed 310
Helix 17
AB8
B
5 10Right-handed 310
Helix 18
AB9
B
22 26Right-handed 310
Helix 19
AC1
B
34 36Right-handed 310
Helix 20
AC2
B
41 56Right-handed alpha
Helix 21
AC3
B
71 84Right-handed alpha
Helix 22
AC4
B
97 107Right-handed alpha
Helix 23
AC5
B
115 117Right-handed 310
Helix 24
AC6
B
118 133Right-handed alpha
Helix 25
AC7
B
146 154Right-handed alpha
Helix 26
AC8
B
155 164Right-handed alpha
Helix 27
AC9
B
178 192Right-handed alpha
Helix 28
AD1
B
226 232Right-handed 310
Helix 29
AD2
B
241 257Right-handed alpha
Helix 30
AD3
B
261 277Right-handed alpha
Helix 31
AD4
B
292 299Right-handed 310
Helix 32
AD5
C
5 10Right-handed 310
Helix 33
AD6
C
22 26Right-handed 310
Helix 34
AD7
C
34 36Right-handed 310
Helix 35
AD8
C
41 56Right-handed alpha
Helix 36
AD9
C
71 84Right-handed alpha
Helix 37
AE1
C
97 107Right-handed alpha
Helix 38
AE2
C
115 117Right-handed 310
Helix 39
AE3
C
118 133Right-handed alpha
Helix 40
AE4
C
146 154Right-handed alpha
Helix 41
AE5
C
155 164Right-handed alpha
Helix 42
AE6
C
178 192Right-handed alpha
Helix 43
AE7
C
226 232Right-handed 310
Helix 44
AE8
C
241 257Right-handed alpha
Helix 45
AE9
C
261 277Right-handed alpha
Helix 46
AF1
C
292 299Right-handed 310
Helix 47
AF2
D
5 10Right-handed 310
Helix 48
AF3
D
22 26Right-handed 310
Helix 49
AF4
D
34 36Right-handed 310
Helix 50
AF5
D
41 56Right-handed alpha
Helix 51
AF6
D
71 84Right-handed alpha
Helix 52
AF7
D
97 107Right-handed alpha
Helix 53
AF8
D
115 117Right-handed 310
Helix 54
AF9
D
118 133Right-handed alpha
Helix 55
AG1
D
146 154Right-handed alpha
Helix 56
AG2
D
155 164Right-handed alpha
Helix 57
AG3
D
178 192Right-handed alpha
Helix 58
AG4
D
226 232Right-handed 310
Helix 59
AG5
D
241 257Right-handed alpha
Helix 60
AG6
D
261 277Right-handed alpha
Helix 61
AG7
D
291 299Right-handed 310
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There are 8 sheets in PDB entry 5B1H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
C
15 17parallel
Strand 3
C
27 32anti-parallel
Strand 4
C
283 288parallel
Strand 5
C
170 174parallel
Strand 6
C
196 201parallel
Strand 7
C
234 239parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 240first strand
Strand 2
A
196 202parallel
Strand 3
A
170 174parallel
Strand 4
A
283 288parallel
Strand 5
A
27 32parallel
Strand 6
A
15 17anti-parallel
Strand 7
C
2 3parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 114first strand
Strand 2
A
87 93parallel
Strand 3
A
64 68parallel
Strand 4
A
137 138parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
27 32anti-parallel
Strand 3
B
283 288parallel
Strand 4
B
170 174parallel
Strand 5
B
196 202parallel
Strand 6
B
236 240parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 114first strand
Strand 2
B
87 93parallel
Strand 3
B
64 68parallel
Strand 4
B
137 138parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
110 114first strand
Strand 2
C
87 93parallel
Strand 3
C
64 68parallel
Strand 4
C
137 138parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
15 17first strand
Strand 2
D
27 32anti-parallel
Strand 3
D
283 288parallel
Strand 4
D
170 174parallel
Strand 5
D
196 201parallel
Strand 6
D
234 239parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
110 114first strand
Strand 2
D
87 93parallel
Strand 3
D
64 68parallel
Strand 4
D
137 138parallel
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