Analysis of interatomic Contacts of Structural Units in PDB entry:
5B2Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5B2Q entry

There is 1 chain in PDB entry 5B2Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 1400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 5B2Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 33Right-handed 310
Helix 2
AA2
A
52 82Right-handed alpha
Helix 3
AA3
A
88 100Right-handed alpha
Helix 4
AA4
A
124 134Right-handed alpha
Helix 5
AA5
A
142 148Right-handed alpha
Helix 6
AA6
A
150 180Right-handed alpha
Helix 7
AA7
A
191 198Right-handed alpha
Helix 8
AA8
A
198 203Right-handed alpha
Helix 9
AA9
A
205 212Right-handed alpha
Helix 10
AB1
A
235 242Right-handed alpha
Helix 11
AB2
A
243 255Right-handed alpha
Helix 12
AB3
A
259 263Right-handed 310
Helix 13
AB4
A
292 308Right-handed alpha
Helix 14
AB5
A
311 325Right-handed alpha
Helix 15
AB6
A
330 342Right-handed alpha
Helix 16
AB7
A
349 362Right-handed alpha
Helix 17
AB8
A
364 373Right-handed alpha
Helix 18
AB9
A
374 378Right-handed 310
Helix 19
AC1
A
384 399Right-handed alpha
Helix 20
AC2
A
406 410Right-handed 310
Helix 21
AC3
A
416 431Right-handed alpha
Helix 22
AC4
A
432 438Right-handed alpha
Helix 23
AC5
A
441 446Right-handed 310
Helix 24
AC6
A
466 474Right-handed alpha
Helix 25
AC7
A
476 486Right-handed alpha
Helix 26
AC8
A
487 495Right-handed alpha
Helix 27
AC9
A
496 503Right-handed alpha
Helix 28
AD1
A
520 525Right-handed alpha
Helix 29
AD2
A
530 543Right-handed alpha
Helix 30
AD3
A
545 549Right-handed 310
Helix 31
AD4
A
552 565Right-handed alpha
Helix 32
AD5
A
577 587Right-handed alpha
Helix 33
AD6
A
590 594Right-handed 310
Helix 34
AD7
A
606 623Right-handed alpha
Helix 35
AD8
A
663 666Right-handed 310
Helix 36
AD9
A
667 677Right-handed alpha
Helix 37
AE1
A
679 688Right-handed alpha
Helix 38
AE2
A
691 703Right-handed alpha
Helix 39
AE3
A
705 720Right-handed alpha
Helix 40
AE4
A
723 735Right-handed alpha
Helix 41
AE5
A
739 751Right-handed alpha
Helix 42
AE6
A
762 773Right-handed alpha
Helix 43
AE7
A
779 788Right-handed alpha
Helix 44
AE8
A
792 804Right-handed alpha
Helix 45
AE9
A
814 826Right-handed alpha
Helix 46
AF1
A
859 877Right-handed alpha
Helix 47
AF2
A
877 887Right-handed alpha
Helix 48
AF3
A
900 912Right-handed alpha
Helix 49
AF4
A
917 926Right-handed alpha
Helix 50
AF5
A
933 943Right-handed alpha
Helix 51
AF6
A
983 985Right-handed 310
Helix 52
AF7
A
1053 1063Right-handed alpha
Helix 53
AF8
A
1064 1066Right-handed 310
Helix 54
AF9
A
1070 1083Right-handed alpha
Helix 55
AG1
A
1089 1110Right-handed alpha
Helix 56
AG2
A
1132 1144Right-handed alpha
Helix 57
AG3
A
1144 1149Right-handed alpha
Helix 58
AG4
A
1158 1177Right-handed alpha
Helix 59
AG5
A
1208 1213Right-handed alpha
Helix 60
AG6
A
1282 1292Right-handed alpha
Helix 61
AG7
A
1293 1296Right-handed 310
Helix 62
AG8
A
1308 1319Right-handed alpha
Helix 63
AG9
A
1333 1346Right-handed alpha
Helix 64
AH1
A
1347 1350Right-handed 310
Helix 65
AH2
A
1355 1364Right-handed alpha
Helix 66
AH3
A
1375 1385Right-handed alpha
Helix 67
AH4
A
1386 1388Right-handed 310
Helix 68
AH5
A
1398 1412Right-handed alpha
Helix 69
AH6
A
1416 1425Right-handed alpha
Helix 70
AH7
A
1498 1501Right-handed 310
Helix 71
AH8
A
1536 1541Right-handed alpha
Helix 72
AH9
A
1569 1579Right-handed alpha
Helix 73
AI1
A
1586 1595Right-handed alpha
Helix 74
AI2
A
1608 1622Right-handed alpha
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There are 14 sheets in PDB entry 5B2Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
3 5anti-parallel
Strand 3
A
890 899parallel
Strand 4
A
1117 1123parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
3 5anti-parallel
Strand 3
A
890 899parallel
Strand 4
A
8 12parallel
Strand 5
A
16 22anti-parallel
Strand 6
A
36 43anti-parallel
Strand 7
A
1220 1224parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
463 465first strand
Strand 2
A
654 656anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
513 514first strand
Strand 2
A
528 529parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
597 598first strand
Strand 2
A
601 602anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
629 635first strand
Strand 2
A
640 648anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
827 828first strand
Strand 2
A
844 845anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
966 969first strand
Strand 2
A
987 990anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1441 1447first strand
Strand 2
A
1365 1373anti-parallel
Strand 3
A
1240 1249anti-parallel
Strand 4
A
1463 1470anti-parallel
Strand 5
A
1452 1457anti-parallel
Strand 6
A
1505 1507anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1270 1273first strand
Strand 2
A
1261 1264anti-parallel
Strand 3
A
1252 1255anti-parallel
Strand 4
A
1327 1330anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1276 1277first strand
Strand 2
A
1280 1281anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1390 1391first strand
Strand 2
A
1394 1395anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1491 1496first strand
Strand 2
A
1481 1486anti-parallel
Strand 3
A
1522 1524anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1530 1533first strand
Strand 2
A
1544 1550anti-parallel
Strand 3
A
1558 1563anti-parallel
Strand 4
A
1599 1603anti-parallel
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