Analysis of interatomic Contacts of Structural Units in PDB entry:
5B51


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5B51 entry

There is 1 chain in PDB entry 5B51 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 32VAL 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5B51. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 44Right-handed alpha
Helix 2
AA2
A
49 53Right-handed 310
Helix 3
AA3
A
103 112Right-handed alpha
Helix 4
AA4
A
114 118Right-handed 310
Helix 5
AA5
A
127 131Right-handed 310
Helix 6
AA6
A
144 151Right-handed alpha
Helix 7
AA7
A
164 174Right-handed alpha
Helix 8
AA8
A
186 188Right-handed 310
Helix 9
AA9
A
189 201Right-handed alpha
Helix 10
AB1
A
203 229Right-handed alpha
Helix 11
AB2
A
253 255Right-handed 310
Helix 12
AB3
A
256 264Right-handed alpha
Helix 13
AB4
A
269 274Right-handed alpha
Helix 14
AB5
A
282 290Right-handed alpha
Helix 15
AB6
A
298 304Right-handed alpha
Helix 16
AB7
A
305 312Right-handed alpha
Helix 17
AB8
A
319 324Right-handed alpha
Helix 18
AB9
A
331 336Right-handed alpha
Helix 19
AC1
A
338 340Right-handed 310
Helix 20
AC2
A
341 355Right-handed alpha
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There are 5 sheets in PDB entry 5B51. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
327 330parallel
Strand 3
A
293 297parallel
Strand 4
A
235 241parallel
Strand 5
A
267 268parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
327 330parallel
Strand 3
A
293 297parallel
Strand 4
A
235 241parallel
Strand 5
A
248 251anti-parallel
Strand 6
A
278 280anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
87 90anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 99first strand
Strand 2
A
155 158parallel
Strand 3
A
178 180parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
142 143anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il