Analysis of interatomic Contacts of Structural Units in PDB entry:
5B5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5B5X entry

There is 1 chain in PDB entry 5B5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 81LEU 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5B5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
91 105Right-handed alpha
Helix 2
AA2
A
121 123Right-handed 310
Helix 3
AA3
A
124 135Right-handed alpha
Helix 4
AA4
A
144 147Right-handed 310
Helix 5
AA5
A
150 158Right-handed alpha
Helix 6
AA6
A
204 216Right-handed alpha
Helix 7
AA7
A
217 222Right-handed alpha
Helix 8
AA8
A
232 248Right-handed alpha
Helix 9
AA9
A
257 281Right-handed alpha
Helix 10
AB1
A
331 335Right-handed 310
Helix 11
AB2
A
338 342Right-handed 310
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There are 2 sheets in PDB entry 5B5X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
313 322anti-parallel
Strand 3
A
286 297anti-parallel
Strand 4
A
179 181parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 143first strand
Strand 2
A
113 119parallel
Strand 3
A
170 177parallel
Strand 4
A
286 297parallel
Strand 5
A
313 322anti-parallel
Strand 6
A
327 329anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il