Analysis of interatomic Contacts of Structural Units in PDB entry:
5B63


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5B63 entry

There are 3 chains in PDB entry 5B63 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 577
B
 G 901 C 975
C
 MET 1LEU 562
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 5B63. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 13Right-handed alpha
Helix 2
AA2
A
14 19Right-handed 310
Helix 3
AA3
A
33 37Right-handed 310
Helix 4
AA4
A
43 48Right-handed alpha
Helix 5
AA5
A
54 64Right-handed alpha
Helix 6
AA6
A
88 101Right-handed alpha
Helix 7
AA7
A
129 131Right-handed 310
Helix 8
AA8
A
132 150Right-handed alpha
Helix 9
AA9
A
165 177Right-handed alpha
Helix 10
AB1
A
191 200Right-handed alpha
Helix 11
AB2
A
207 214Right-handed alpha
Helix 12
AB3
A
214 220Right-handed alpha
Helix 13
AB4
A
221 247Right-handed alpha
Helix 14
AB5
A
251 255Right-handed 310
Helix 15
AB6
A
265 274Right-handed alpha
Helix 16
AB7
A
314 327Right-handed alpha
Helix 17
AB8
A
341 354Right-handed alpha
Helix 18
AB9
A
389 407Right-handed alpha
Helix 19
AC1
A
413 416Right-handed 310
Helix 20
AC2
A
417 431Right-handed alpha
Helix 21
AC3
A
445 450Right-handed alpha
Helix 22
AC4
A
456 474Right-handed alpha
Helix 23
AC5
A
477 482Right-handed alpha
Helix 24
AC6
A
490 502Right-handed alpha
Helix 25
AC7
A
502 514Right-handed alpha
Helix 26
AC8
A
516 534Right-handed alpha
Helix 27
AC9
A
544 570Right-handed alpha
Helix 28
AD1
C
2 16Right-handed alpha
Helix 29
AD2
C
33 37Right-handed 310
Helix 30
AD3
C
43 51Right-handed alpha
Helix 31
AD4
C
54 64Right-handed alpha
Helix 32
AD5
C
90 101Right-handed alpha
Helix 33
AD6
C
129 131Right-handed 310
Helix 34
AD7
C
132 149Right-handed alpha
Helix 35
AD8
C
165 174Right-handed alpha
Helix 36
AD9
C
211 218Right-handed alpha
Helix 37
AE1
C
230 247Right-handed alpha
Helix 38
AE2
C
264 272Right-handed alpha
Helix 39
AE3
C
312 327Right-handed alpha
Helix 40
AE4
C
342 354Right-handed alpha
Helix 41
AE5
C
389 409Right-handed alpha
Helix 42
AE6
C
414 431Right-handed alpha
Helix 43
AE7
C
445 450Right-handed alpha
Helix 44
AE8
C
456 471Right-handed alpha
Helix 45
AE9
C
477 482Right-handed alpha
Helix 46
AF1
C
490 502Right-handed alpha
Helix 47
AF2
C
502 514Right-handed alpha
Helix 48
AF3
C
516 535Right-handed alpha
Helix 49
AF4
C
544 570Right-handed alpha
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There are 7 sheets in PDB entry 5B63. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
39 41anti-parallel
Strand 3
A
82 87anti-parallel
Strand 4
A
72 78anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 156first strand
Strand 2
A
114 118parallel
Strand 3
A
332 336parallel
Strand 4
A
364 367parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 373first strand
Strand 2
A
442 443parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 30first strand
Strand 2
C
39 41anti-parallel
Strand 3
C
82 87anti-parallel
Strand 4
C
72 78anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
152 156first strand
Strand 2
C
114 118parallel
Strand 3
C
332 336parallel
Strand 4
C
364 367parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
278 279first strand
Strand 2
C
286 287anti-parallel
Strand 3
C
302 303anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
372 373first strand
Strand 2
C
442 443parallel
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