Analysis of interatomic Contacts of Structural Units in PDB entry:
5B6F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5B6F entry

There are 8 chains in PDB entry 5B6F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 20	ARG 235
B	VAL 21	ARG 237
C	ASP 20	ASN 236
D	VAL 21	ARG 237
E	ASP 20	ARG 235
F	GLU 20	ARG 237
G	ASP 20	ASN 236
H	GLU 20	PRO 236

There are 37 helices in PDB entry 5B6F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	103	107	Right-handed 310
Helix 2	AA2	A	145	152	Right-handed alpha
Helix 3	AA3	A	207	211	Right-handed alpha
Helix 4	AA4	B	47	51	Right-handed 310
Helix 5	AA5	B	72	76	Right-handed 310
Helix 6	AA6	B	83	86	Right-handed 310
Helix 7	AA7	B	95	97	Right-handed 310
Helix 8	AA8	B	108	112	Right-handed 310
Helix 9	AA9	B	180	182	Right-handed 310
Helix 10	AB1	B	224	227	Right-handed 310
Helix 11	AB2	C	103	107	Right-handed 310
Helix 12	AB3	C	145	152	Right-handed alpha
Helix 13	AB4	C	207	212	Right-handed alpha
Helix 14	AB5	D	72	76	Right-handed 310
Helix 15	AB6	D	83	86	Right-handed 310
Helix 16	AB7	D	95	97	Right-handed 310
Helix 17	AB8	D	108	112	Right-handed 310
Helix 18	AB9	D	180	182	Right-handed 310
Helix 19	AC1	D	224	227	Right-handed 310
Helix 20	AC2	E	103	107	Right-handed 310
Helix 21	AC3	E	145	152	Right-handed alpha
Helix 22	AC4	E	207	212	Right-handed alpha
Helix 23	AC5	F	47	51	Right-handed 310
Helix 24	AC6	F	72	76	Right-handed 310
Helix 25	AC7	F	83	86	Right-handed 310
Helix 26	AC8	F	95	97	Right-handed 310
Helix 27	AC9	F	108	112	Right-handed 310
Helix 28	AD1	F	180	182	Right-handed 310
Helix 29	AD2	F	224	227	Right-handed 310
Helix 30	AD3	G	103	107	Right-handed 310
Helix 31	AD4	G	145	152	Right-handed alpha
Helix 32	AD5	G	207	212	Right-handed alpha
Helix 33	AD6	H	72	76	Right-handed 310
Helix 34	AD7	H	83	86	Right-handed 310
Helix 35	AD8	H	95	97	Right-handed 310
Helix 36	AD9	H	108	112	Right-handed 310
Helix 37	AE1	H	180	182	Right-handed 310

There are 39 sheets in PDB entry 5B6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	26	first strand
Strand 2	A	38	44	anti-parallel
Strand 3	A	94	99	anti-parallel
Strand 4	A	86	91	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	33	first strand
Strand 2	A	126	131	parallel
Strand 3	A	108	114	anti-parallel
Strand 4	A	57	62	anti-parallel
Strand 5	A	69	73	anti-parallel
Strand 6	A	77	78	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	33	first strand
Strand 2	A	126	131	parallel
Strand 3	A	108	114	anti-parallel
Strand 4	A	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	142	first strand
Strand 2	A	153	163	anti-parallel
Strand 3	A	197	206	anti-parallel
Strand 4	A	183	187	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	178	first strand
Strand 2	A	169	174	anti-parallel
Strand 3	A	215	221	anti-parallel
Strand 4	A	229	234	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	26	first strand
Strand 2	B	37	44	anti-parallel
Strand 3	B	99	104	anti-parallel
Strand 4	B	89	94	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	31	first strand
Strand 2	B	131	135	parallel
Strand 3	B	113	119	anti-parallel
Strand 4	B	53	59	anti-parallel
Strand 5	B	63	70	anti-parallel
Strand 6	B	79	81	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	148	first strand
Strand 2	B	159	169	anti-parallel
Strand 3	B	198	208	anti-parallel
Strand 4	B	187	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	148	first strand
Strand 2	B	159	169	anti-parallel
Strand 3	B	198	208	anti-parallel
Strand 4	B	193	195	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	178	first strand
Strand 2	B	218	223	anti-parallel
Strand 3	B	228	233	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	26	first strand
Strand 2	C	38	44	anti-parallel
Strand 3	C	94	99	anti-parallel
Strand 4	C	86	91	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	33	first strand
Strand 2	C	126	131	parallel
Strand 3	C	108	114	anti-parallel
Strand 4	C	57	62	anti-parallel
Strand 5	C	68	73	anti-parallel
Strand 6	C	77	78	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	33	first strand
Strand 2	C	126	131	parallel
Strand 3	C	108	114	anti-parallel
Strand 4	C	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	138	142	first strand
Strand 2	C	153	163	anti-parallel
Strand 3	C	197	206	anti-parallel
Strand 4	C	183	187	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	177	179	first strand
Strand 2	C	169	174	anti-parallel
Strand 3	C	215	221	anti-parallel
Strand 4	C	229	234	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	22	26	first strand
Strand 2	D	37	44	anti-parallel
Strand 3	D	99	104	anti-parallel
Strand 4	D	89	94	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	31	first strand
Strand 2	D	131	135	parallel
Strand 3	D	113	119	anti-parallel
Strand 4	D	53	59	anti-parallel
Strand 5	D	63	70	anti-parallel
Strand 6	D	79	81	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	144	148	first strand
Strand 2	D	159	169	anti-parallel
Strand 3	D	198	208	anti-parallel
Strand 4	D	187	195	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	175	178	first strand
Strand 2	D	218	223	anti-parallel
Strand 3	D	228	233	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	23	26	first strand
Strand 2	E	38	44	anti-parallel
Strand 3	E	94	99	anti-parallel
Strand 4	E	86	91	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	32	first strand
Strand 2	E	126	130	parallel
Strand 3	E	108	114	anti-parallel
Strand 4	E	57	62	anti-parallel
Strand 5	E	68	73	anti-parallel
Strand 6	E	77	78	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	32	first strand
Strand 2	E	126	130	parallel
Strand 3	E	108	114	anti-parallel
Strand 4	E	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	138	142	first strand
Strand 2	E	153	163	anti-parallel
Strand 3	E	197	206	anti-parallel
Strand 4	E	183	187	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	177	179	first strand
Strand 2	E	168	174	anti-parallel
Strand 3	E	215	222	anti-parallel
Strand 4	E	229	234	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	22	26	first strand
Strand 2	F	37	44	anti-parallel
Strand 3	F	99	104	anti-parallel
Strand 4	F	89	94	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	31	first strand
Strand 2	F	131	135	parallel
Strand 3	F	113	120	anti-parallel
Strand 4	F	52	59	anti-parallel
Strand 5	F	63	70	anti-parallel
Strand 6	F	79	81	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	144	148	first strand
Strand 2	F	159	169	anti-parallel
Strand 3	F	198	208	anti-parallel
Strand 4	F	187	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	144	148	first strand
Strand 2	F	159	169	anti-parallel
Strand 3	F	198	208	anti-parallel
Strand 4	F	193	195	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	175	178	first strand
Strand 2	F	218	223	anti-parallel
Strand 3	F	228	233	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	23	26	first strand
Strand 2	G	38	44	anti-parallel
Strand 3	G	94	99	anti-parallel
Strand 4	G	86	91	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	33	first strand
Strand 2	G	126	131	parallel
Strand 3	G	108	114	anti-parallel
Strand 4	G	57	62	anti-parallel
Strand 5	G	68	73	anti-parallel
Strand 6	G	77	78	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	33	first strand
Strand 2	G	126	131	parallel
Strand 3	G	108	114	anti-parallel
Strand 4	G	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	138	142	first strand
Strand 2	G	153	163	anti-parallel
Strand 3	G	197	206	anti-parallel
Strand 4	G	183	187	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	177	179	first strand
Strand 2	G	168	174	anti-parallel
Strand 3	G	215	222	anti-parallel
Strand 4	G	229	234	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	22	26	first strand
Strand 2	H	37	44	anti-parallel
Strand 3	H	99	104	anti-parallel
Strand 4	H	89	94	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	30	31	first strand
Strand 2	H	131	135	parallel
Strand 3	H	113	120	anti-parallel
Strand 4	H	52	59	anti-parallel
Strand 5	H	63	70	anti-parallel
Strand 6	H	79	81	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	144	148	first strand
Strand 2	H	159	169	anti-parallel
Strand 3	H	198	208	anti-parallel
Strand 4	H	187	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	144	148	first strand
Strand 2	H	159	169	anti-parallel
Strand 3	H	198	208	anti-parallel
Strand 4	H	193	195	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	175	178	first strand
Strand 2	H	218	223	anti-parallel
Strand 3	H	228	233	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5B6F

Analysis of interatomic Contacts of Structural Units in PDB entry:
5B6F