Analysis of interatomic Contacts of Structural Units in PDB entry:
5B6I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5B6I entry

There are 2 chains in PDB entry 5B6I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 8ARG 299
B
 ARG 8ARG 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5B6I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 35Right-handed alpha
Helix 2
AA2
A
51 58Right-handed alpha
Helix 3
AA3
A
62 66Right-handed 310
Helix 4
AA4
A
127 135Right-handed alpha
Helix 5
AA5
A
156 161Right-handed alpha
Helix 6
AA6
A
162 171Right-handed alpha
Helix 7
AA7
A
174 178Right-handed 310
Helix 8
AA8
A
183 187Right-handed 310
Helix 9
AA9
A
222 228Right-handed alpha
Helix 10
AB1
A
253 258Right-handed 310
Helix 11
AB2
A
283 287Right-handed 310
Helix 12
AB3
B
22 35Right-handed alpha
Helix 13
AB4
B
51 60Right-handed alpha
Helix 14
AB5
B
62 66Right-handed 310
Helix 15
AB6
B
127 135Right-handed alpha
Helix 16
AB7
B
156 161Right-handed alpha
Helix 17
AB8
B
162 171Right-handed alpha
Helix 18
AB9
B
174 178Right-handed 310
Helix 19
AC1
B
183 187Right-handed 310
Helix 20
AC2
B
222 228Right-handed alpha
Helix 21
AC3
B
253 258Right-handed 310
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There are 6 sheets in PDB entry 5B6I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 42first strand
Strand 2
A
10 15parallel
Strand 3
A
71 75parallel
Strand 4
A
118 121parallel
Strand 5
A
87 91anti-parallel
Strand 6
A
136 141anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
201 210anti-parallel
Strand 3
A
293 298anti-parallel
Strand 4
A
235 240anti-parallel
Strand 5
A
244 249anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
201 210anti-parallel
Strand 3
A
215 221anti-parallel
Strand 4
A
272 277anti-parallel
Strand 5
A
263 267anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 42first strand
Strand 2
B
10 15parallel
Strand 3
B
71 75parallel
Strand 4
B
118 121parallel
Strand 5
B
87 91anti-parallel
Strand 6
B
136 141anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 198first strand
Strand 2
B
201 209anti-parallel
Strand 3
B
293 298anti-parallel
Strand 4
B
235 240anti-parallel
Strand 5
B
244 249anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 198first strand
Strand 2
B
201 209anti-parallel
Strand 3
B
216 221anti-parallel
Strand 4
B
272 277anti-parallel
Strand 5
B
263 267anti-parallel
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