Analysis of interatomic Contacts of Structural Units in PDB entry:
5B70

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5B70 entry

There are 4 chains in PDB entry 5B70 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 83	LEU 301
B	GLY 83	LEU 301
C	GLY 83	LEU 301
D	GLY 83	LEU 301

There are 34 helices in PDB entry 5B70. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	108	124	Right-handed alpha
Helix 2	AA2	A	135	145	Right-handed alpha
Helix 3	AA3	A	179	181	Right-handed 310
Helix 4	AA4	A	189	193	Right-handed 310
Helix 5	AA5	A	205	215	Right-handed alpha
Helix 6	AA6	A	219	223	Right-handed 310
Helix 7	AA7	A	230	240	Right-handed alpha
Helix 8	AA8	A	249	255	Right-handed alpha
Helix 9	AA9	A	286	299	Right-handed alpha
Helix 10	AB1	B	108	124	Right-handed alpha
Helix 11	AB2	B	135	145	Right-handed alpha
Helix 12	AB3	B	189	193	Right-handed 310
Helix 13	AB4	B	206	215	Right-handed alpha
Helix 14	AB5	B	219	221	Right-handed 310
Helix 15	AB6	B	230	240	Right-handed alpha
Helix 16	AB7	B	249	255	Right-handed alpha
Helix 17	AB8	B	286	300	Right-handed alpha
Helix 18	AB9	C	108	124	Right-handed alpha
Helix 19	AC1	C	135	145	Right-handed alpha
Helix 20	AC2	C	178	182	Right-handed alpha
Helix 21	AC3	C	189	193	Right-handed 310
Helix 22	AC4	C	205	215	Right-handed alpha
Helix 23	AC5	C	219	223	Right-handed 310
Helix 24	AC6	C	230	240	Right-handed alpha
Helix 25	AC7	C	249	255	Right-handed alpha
Helix 26	AC8	C	286	299	Right-handed alpha
Helix 27	AC9	D	108	124	Right-handed alpha
Helix 28	AD1	D	135	145	Right-handed alpha
Helix 29	AD2	D	189	193	Right-handed 310
Helix 30	AD3	D	205	215	Right-handed alpha
Helix 31	AD4	D	219	223	Right-handed 310
Helix 32	AD5	D	230	240	Right-handed alpha
Helix 33	AD6	D	249	255	Right-handed alpha
Helix 34	AD7	D	286	300	Right-handed alpha

There are 9 sheets in PDB entry 5B70. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	133	first strand
Strand 2	A	98	104	parallel
Strand 3	A	150	155	parallel
Strand 4	A	273	280	anti-parallel
Strand 5	A	163	177	anti-parallel
Strand 6	A	245	248	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	133	first strand
Strand 2	A	98	104	parallel
Strand 3	A	150	155	parallel
Strand 4	A	273	280	anti-parallel
Strand 5	A	163	177	anti-parallel
Strand 6	A	262	265	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	133	first strand
Strand 2	B	98	104	parallel
Strand 3	B	150	155	parallel
Strand 4	B	273	280	anti-parallel
Strand 5	B	163	177	anti-parallel
Strand 6	B	245	248	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	133	first strand
Strand 2	B	98	104	parallel
Strand 3	B	150	155	parallel
Strand 4	B	273	280	anti-parallel
Strand 5	B	163	177	anti-parallel
Strand 6	B	262	265	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	201	first strand
Strand 2	B	223	228	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	133	first strand
Strand 2	C	98	104	parallel
Strand 3	C	150	155	parallel
Strand 4	C	273	280	anti-parallel
Strand 5	C	163	177	anti-parallel
Strand 6	C	245	248	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	133	first strand
Strand 2	C	98	104	parallel
Strand 3	C	150	155	parallel
Strand 4	C	273	280	anti-parallel
Strand 5	C	163	177	anti-parallel
Strand 6	C	262	265	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	133	first strand
Strand 2	D	98	104	parallel
Strand 3	D	150	155	parallel
Strand 4	D	273	280	anti-parallel
Strand 5	D	163	177	anti-parallel
Strand 6	D	245	248	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	133	first strand
Strand 2	D	98	104	parallel
Strand 3	D	150	155	parallel
Strand 4	D	273	280	anti-parallel
Strand 5	D	163	177	anti-parallel
Strand 6	D	262	265	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5B70

Analysis of interatomic Contacts of Structural Units in PDB entry:
5B70