Analysis of interatomic Contacts of Structural Units in PDB entry:
5B7B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5B7B entry

There are 6 chains in PDB entry 5B7B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 21	PHE 489
B	ASN 21	PHE 489
C	ASN 21	PHE 489
D	ASN 21	PHE 489
E	ASN 21	PHE 489
F	ASN 21	PHE 489

There are119 helices in PDB entry 5B7B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	47	Right-handed alpha
Helix 2	AA2	A	50	55	Right-handed alpha
Helix 3	AA3	A	56	71	Right-handed alpha
Helix 4	AA4	A	112	124	Right-handed alpha
Helix 5	AA5	A	129	148	Right-handed alpha
Helix 6	AA6	A	150	157	Right-handed alpha
Helix 7	AA7	A	163	167	Right-handed 310
Helix 8	AA8	A	177	184	Right-handed alpha
Helix 9	AA9	A	185	201	Right-handed alpha
Helix 10	AB1	A	214	230	Right-handed alpha
Helix 11	AB2	A	232	245	Right-handed alpha
Helix 12	AB3	A	249	263	Right-handed alpha
Helix 13	AB4	A	277	287	Right-handed alpha
Helix 14	AB5	A	290	295	Right-handed alpha
Helix 15	AB6	A	301	309	Right-handed alpha
Helix 16	AB7	A	321	334	Right-handed alpha
Helix 17	AB8	A	340	349	Right-handed alpha
Helix 18	AB9	A	421	426	Right-handed alpha
Helix 19	AC1	A	439	450	Right-handed alpha
Helix 20	AC2	B	22	47	Right-handed alpha
Helix 21	AC3	B	50	55	Right-handed alpha
Helix 22	AC4	B	56	71	Right-handed alpha
Helix 23	AC5	B	112	124	Right-handed alpha
Helix 24	AC6	B	129	148	Right-handed alpha
Helix 25	AC7	B	150	158	Right-handed alpha
Helix 26	AC8	B	160	167	Right-handed 310
Helix 27	AC9	B	177	184	Right-handed alpha
Helix 28	AD1	B	185	198	Right-handed alpha
Helix 29	AD2	B	215	230	Right-handed alpha
Helix 30	AD3	B	232	240	Right-handed alpha
Helix 31	AD4	B	249	263	Right-handed alpha
Helix 32	AD5	B	277	287	Right-handed alpha
Helix 33	AD6	B	290	295	Right-handed alpha
Helix 34	AD7	B	301	309	Right-handed alpha
Helix 35	AD8	B	321	334	Right-handed alpha
Helix 36	AD9	B	340	349	Right-handed alpha
Helix 37	AE1	B	354	358	Right-handed 310
Helix 38	AE2	B	370	374	Right-handed 310
Helix 39	AE3	B	421	426	Right-handed alpha
Helix 40	AE4	B	439	451	Right-handed alpha
Helix 41	AE5	C	22	47	Right-handed alpha
Helix 42	AE6	C	50	55	Right-handed alpha
Helix 43	AE7	C	56	71	Right-handed alpha
Helix 44	AE8	C	112	124	Right-handed alpha
Helix 45	AE9	C	129	148	Right-handed alpha
Helix 46	AF1	C	150	158	Right-handed alpha
Helix 47	AF2	C	160	167	Right-handed 310
Helix 48	AF3	C	177	184	Right-handed alpha
Helix 49	AF4	C	185	198	Right-handed alpha
Helix 50	AF5	C	215	230	Right-handed alpha
Helix 51	AF6	C	232	240	Right-handed alpha
Helix 52	AF7	C	249	263	Right-handed alpha
Helix 53	AF8	C	277	287	Right-handed alpha
Helix 54	AF9	C	290	295	Right-handed alpha
Helix 55	AG1	C	301	309	Right-handed alpha
Helix 56	AG2	C	321	334	Right-handed alpha
Helix 57	AG3	C	340	349	Right-handed alpha
Helix 58	AG4	C	354	358	Right-handed 310
Helix 59	AG5	C	421	426	Right-handed alpha
Helix 60	AG6	C	439	451	Right-handed alpha
Helix 61	AG7	D	22	47	Right-handed alpha
Helix 62	AG8	D	50	55	Right-handed alpha
Helix 63	AG9	D	56	71	Right-handed alpha
Helix 64	AH1	D	112	124	Right-handed alpha
Helix 65	AH2	D	129	148	Right-handed alpha
Helix 66	AH3	D	150	157	Right-handed alpha
Helix 67	AH4	D	163	167	Right-handed 310
Helix 68	AH5	D	177	184	Right-handed alpha
Helix 69	AH6	D	185	201	Right-handed alpha
Helix 70	AH7	D	214	230	Right-handed alpha
Helix 71	AH8	D	232	245	Right-handed alpha
Helix 72	AH9	D	249	266	Right-handed alpha
Helix 73	AI1	D	277	287	Right-handed alpha
Helix 74	AI2	D	290	295	Right-handed alpha
Helix 75	AI3	D	301	310	Right-handed alpha
Helix 76	AI4	D	321	334	Right-handed alpha
Helix 77	AI5	D	340	349	Right-handed alpha
Helix 78	AI6	D	421	426	Right-handed alpha
Helix 79	AI7	D	439	450	Right-handed alpha
Helix 80	AI8	E	22	47	Right-handed alpha
Helix 81	AI9	E	50	55	Right-handed alpha
Helix 82	AJ1	E	56	71	Right-handed alpha
Helix 83	AJ2	E	112	124	Right-handed alpha
Helix 84	AJ3	E	129	148	Right-handed alpha
Helix 85	AJ4	E	150	157	Right-handed alpha
Helix 86	AJ5	E	160	168	Right-handed 310
Helix 87	AJ6	E	177	184	Right-handed alpha
Helix 88	AJ7	E	185	200	Right-handed alpha
Helix 89	AJ8	E	214	228	Right-handed alpha
Helix 90	AJ9	E	232	244	Right-handed alpha
Helix 91	AK1	E	249	263	Right-handed alpha
Helix 92	AK2	E	277	287	Right-handed alpha
Helix 93	AK3	E	290	295	Right-handed alpha
Helix 94	AK4	E	301	310	Right-handed alpha
Helix 95	AK5	E	321	334	Right-handed alpha
Helix 96	AK6	E	340	349	Right-handed alpha
Helix 97	AK7	E	354	358	Right-handed 310
Helix 98	AK8	E	421	427	Right-handed alpha
Helix 99	AK9	E	439	451	Right-handed alpha
Helix 100	AL1	F	22	47	Right-handed alpha
Helix 101	AL2	F	50	55	Right-handed alpha
Helix 102	AL3	F	56	71	Right-handed alpha
Helix 103	AL4	F	112	124	Right-handed alpha
Helix 104	AL5	F	129	148	Right-handed alpha
Helix 105	AL6	F	150	157	Right-handed alpha
Helix 106	AL7	F	160	167	Right-handed 310
Helix 107	AL8	F	177	184	Right-handed alpha
Helix 108	AL9	F	185	200	Right-handed alpha
Helix 109	AM1	F	214	228	Right-handed alpha
Helix 110	AM2	F	232	244	Right-handed alpha
Helix 111	AM3	F	249	266	Right-handed alpha
Helix 112	AM4	F	277	287	Right-handed alpha
Helix 113	AM5	F	290	295	Right-handed alpha
Helix 114	AM6	F	301	310	Right-handed alpha
Helix 115	AM7	F	321	334	Right-handed alpha
Helix 116	AM8	F	340	349	Right-handed alpha
Helix 117	AM9	F	354	358	Right-handed 310
Helix 118	AN1	F	421	427	Right-handed alpha
Helix 119	AN2	F	439	450	Right-handed alpha

There are 22 sheets in PDB entry 5B7B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	100	first strand
Strand 2	A	103	110	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	316	first strand
Strand 2	A	375	379	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	385	386	first strand
Strand 2	A	464	465	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	416	417	first strand
Strand 2	C	456	457	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	456	457	first strand
Strand 2	F	416	417	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	100	first strand
Strand 2	B	103	110	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	316	first strand
Strand 2	B	375	378	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	416	417	first strand
Strand 2	E	456	457	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	456	457	first strand
Strand 2	D	416	417	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	100	first strand
Strand 2	C	103	110	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	316	first strand
Strand 2	C	375	378	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	416	417	first strand
Strand 2	F	456	457	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	100	first strand
Strand 2	D	103	110	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	312	316	first strand
Strand 2	D	375	379	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	385	386	first strand
Strand 2	D	464	465	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	456	457	first strand
Strand 2	E	416	417	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	93	100	first strand
Strand 2	E	103	110	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	313	316	first strand
Strand 2	E	375	378	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	385	386	first strand
Strand 2	E	464	465	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	93	100	first strand
Strand 2	F	103	110	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	313	316	first strand
Strand 2	F	375	378	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	385	386	first strand
Strand 2	F	464	465	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5B7B

Analysis of interatomic Contacts of Structural Units in PDB entry:
5B7B