Analysis of interatomic Contacts of Structural Units in PDB entry:
5BK6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BK6 entry

There are 4 chains in PDB entry 5BK6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 4PRO 233
B
 ASN 8PRO 233
C
 MET 4PRO 233
D
 ASN 8PRO 233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 5BK6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 28Right-handed 310
Helix 2
AA2
A
38 43Right-handed alpha
Helix 3
AA3
A
46 52Right-handed alpha
Helix 4
AA4
A
55 60Right-handed alpha
Helix 5
AA5
A
61 75Right-handed alpha
Helix 6
AA6
A
94 104Right-handed alpha
Helix 7
AA7
A
122 126Right-handed 310
Helix 8
AA8
A
128 132Right-handed 310
Helix 9
AA9
A
152 160Right-handed alpha
Helix 10
AB1
A
174 186Right-handed alpha
Helix 11
AB2
A
201 218Right-handed alpha
Helix 12
AB3
A
224 232Right-handed alpha
Helix 13
AB4
B
26 28Right-handed 310
Helix 14
AB5
B
38 43Right-handed alpha
Helix 15
AB6
B
46 51Right-handed alpha
Helix 16
AB7
B
55 60Right-handed alpha
Helix 17
AB8
B
61 75Right-handed alpha
Helix 18
AB9
B
94 104Right-handed alpha
Helix 19
AC1
B
128 132Right-handed 310
Helix 20
AC2
B
152 161Right-handed alpha
Helix 21
AC3
B
174 186Right-handed alpha
Helix 22
AC4
B
201 218Right-handed alpha
Helix 23
AC5
B
224 232Right-handed alpha
Helix 24
AC6
C
26 28Right-handed 310
Helix 25
AC7
C
38 43Right-handed alpha
Helix 26
AC8
C
46 51Right-handed alpha
Helix 27
AC9
C
54 60Right-handed alpha
Helix 28
AD1
C
61 75Right-handed alpha
Helix 29
AD2
C
94 104Right-handed alpha
Helix 30
AD3
C
122 126Right-handed 310
Helix 31
AD4
C
128 132Right-handed 310
Helix 32
AD5
C
152 160Right-handed alpha
Helix 33
AD6
C
174 186Right-handed alpha
Helix 34
AD7
C
201 218Right-handed alpha
Helix 35
AD8
C
224 232Right-handed alpha
Helix 36
AD9
D
26 28Right-handed 310
Helix 37
AE1
D
38 43Right-handed alpha
Helix 38
AE2
D
46 51Right-handed alpha
Helix 39
AE3
D
55 60Right-handed alpha
Helix 40
AE4
D
61 75Right-handed alpha
Helix 41
AE5
D
94 104Right-handed alpha
Helix 42
AE6
D
122 126Right-handed 310
Helix 43
AE7
D
128 132Right-handed 310
Helix 44
AE8
D
152 160Right-handed alpha
Helix 45
AE9
D
174 186Right-handed alpha
Helix 46
AF1
D
201 218Right-handed alpha
Helix 47
AF2
D
224 232Right-handed alpha
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There are 8 sheets in PDB entry 5BK6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 142first strand
Strand 2
A
78 84parallel
Strand 3
A
30 35parallel
Strand 4
A
164 170parallel
Strand 5
A
189 198parallel
Strand 6
A
221 223parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
115 116anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 142first strand
Strand 2
B
78 84parallel
Strand 3
B
30 35parallel
Strand 4
B
164 170parallel
Strand 5
B
189 198parallel
Strand 6
B
221 223parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
115 116anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
138 142first strand
Strand 2
C
78 84parallel
Strand 3
C
30 35parallel
Strand 4
C
164 170parallel
Strand 5
C
189 198parallel
Strand 6
C
221 223parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 112first strand
Strand 2
C
115 116anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
138 142first strand
Strand 2
D
78 84parallel
Strand 3
D
30 35parallel
Strand 4
D
164 170parallel
Strand 5
D
189 198parallel
Strand 6
D
221 223parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 112first strand
Strand 2
D
115 116anti-parallel
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