Analysis of interatomic Contacts of Structural Units in PDB entry:
5BP8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BP8 entry

There is 1 chain in PDB entry 5BP8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 11ALA 525
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5BP8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 26Right-handed alpha
Helix 2
AA2
A
35 46Right-handed alpha
Helix 3
AA3
A
51 63Right-handed alpha
Helix 4
AA4
A
76 92Right-handed alpha
Helix 5
AA5
A
102 120Right-handed alpha
Helix 6
AA6
A
131 150Right-handed alpha
Helix 7
AA7
A
155 162Right-handed 310
Helix 8
AA8
A
170 174Right-handed 310
Helix 9
AA9
A
175 185Right-handed alpha
Helix 10
AB1
A
191 196Right-handed 310
Helix 11
AB2
A
197 202Right-handed alpha
Helix 12
AB3
A
225 234Right-handed alpha
Helix 13
AB4
A
241 254Right-handed alpha
Helix 14
AB5
A
264 280Right-handed alpha
Helix 15
AB6
A
286 297Right-handed alpha
Helix 16
AB7
A
311 325Right-handed alpha
Helix 17
AB8
A
331 338Right-handed 310
Helix 18
AB9
A
353 371Right-handed alpha
Helix 19
AC1
A
374 392Right-handed alpha
Helix 20
AC2
A
406 422Right-handed alpha
Helix 21
AC3
A
423 425Right-handed 310
Helix 22
AC4
A
426 441Right-handed alpha
Helix 23
AC5
A
453 467Right-handed alpha
Helix 24
AC6
A
473 490Right-handed alpha
Helix 25
AC7
A
492 496Right-handed 310
Helix 26
AC8
A
508 524Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5BP8.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 501first strand
Strand 2
A
505 506anti-parallel
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