Analysis of interatomic Contacts of Structural Units in PDB entry:
5BRO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BRO entry

There is 1 chain in PDB entry 5BRO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 53ASN 552
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5BRO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
91 106Right-handed alpha
Helix 2
AA2
A
164 179Right-handed alpha
Helix 3
AA3
A
215 229Right-handed alpha
Helix 4
AA4
A
252 259Right-handed alpha
Helix 5
AA5
A
267 280Right-handed alpha
Helix 6
AA6
A
295 300Right-handed alpha
Helix 7
AA7
A
326 344Right-handed alpha
Helix 8
AA8
A
358 363Right-handed alpha
Helix 9
AA9
A
364 373Right-handed alpha
Helix 10
AB1
A
379 398Right-handed alpha
Helix 11
AB2
A
406 411Right-handed alpha
Helix 12
AB3
A
428 439Right-handed alpha
Helix 13
AB4
A
458 466Right-handed alpha
Helix 14
AB5
A
474 479Right-handed alpha
Helix 15
AB6
A
497 503Right-handed alpha
Helix 16
AB7
A
504 515Right-handed alpha
Helix 17
AB8
A
521 539Right-handed alpha
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There are 4 sheets in PDB entry 5BRO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
126 131parallel
Strand 3
A
157 162parallel
Strand 4
A
149 153anti-parallel
Strand 5
A
187 196anti-parallel
Strand 6
A
62 72anti-parallel
Strand 7
A
123 124parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
126 131parallel
Strand 3
A
157 162parallel
Strand 4
A
149 153anti-parallel
Strand 5
A
187 196anti-parallel
Strand 6
A
180 181anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 208first strand
Strand 2
A
233 237parallel
Strand 3
A
284 291parallel
Strand 4
A
348 352parallel
Strand 5
A
401 405parallel
Strand 6
A
420 423parallel
Strand 7
A
443 445parallel
Strand 8
A
481 488parallel
Strand 9
A
202 208parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 311first strand
Strand 2
A
314 322anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il