Analysis of interatomic Contacts of Structural Units in PDB entry:
5BS6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5BS6 entry

There are 4 chains in PDB entry 5BS6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 3	LEU 225
B	ALA 0	LEU 225
C	ALA 0	LEU 225
D	SER -2	LEU 225

There are 29 helices in PDB entry 5BS6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	55	69	Right-handed alpha
Helix 2	AA2	A	107	114	Right-handed alpha
Helix 3	AA3	A	130	149	Right-handed alpha
Helix 4	AA4	A	150	156	Right-handed 310
Helix 5	AA5	A	161	174	Right-handed alpha
Helix 6	AA6	A	178	188	Right-handed alpha
Helix 7	AA7	A	213	219	Right-handed alpha
Helix 8	AA8	B	55	69	Right-handed alpha
Helix 9	AA9	B	107	114	Right-handed alpha
Helix 10	AB1	B	130	149	Right-handed alpha
Helix 11	AB2	B	150	155	Right-handed 310
Helix 12	AB3	B	161	173	Right-handed alpha
Helix 13	AB4	B	178	188	Right-handed alpha
Helix 14	AB5	B	213	220	Right-handed alpha
Helix 15	AB6	C	0	4	Right-handed 310
Helix 16	AB7	C	55	69	Right-handed alpha
Helix 17	AB8	C	107	114	Right-handed alpha
Helix 18	AB9	C	130	149	Right-handed alpha
Helix 19	AC1	C	150	156	Right-handed 310
Helix 20	AC2	C	161	174	Right-handed alpha
Helix 21	AC3	C	178	189	Right-handed alpha
Helix 22	AC4	C	213	220	Right-handed alpha
Helix 23	AC5	D	55	69	Right-handed alpha
Helix 24	AC6	D	107	114	Right-handed alpha
Helix 25	AC7	D	130	149	Right-handed alpha
Helix 26	AC8	D	151	155	Right-handed 310
Helix 27	AC9	D	161	174	Right-handed alpha
Helix 28	AD1	D	178	188	Right-handed alpha
Helix 29	AD2	D	213	219	Right-handed alpha

There are 12 sheets in PDB entry 5BS6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	44	first strand
Strand 2	A	26	33	anti-parallel
Strand 3	A	12	23	anti-parallel
Strand 4	A	92	100	parallel
Strand 5	A	74	81	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	49	first strand
Strand 2	A	12	23	anti-parallel
Strand 3	A	26	33	anti-parallel
Strand 4	A	116	120	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	160	first strand
Strand 2	A	205	212	anti-parallel
Strand 3	A	192	202	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	44	first strand
Strand 2	B	26	33	anti-parallel
Strand 3	B	12	23	anti-parallel
Strand 4	B	92	100	parallel
Strand 5	B	74	81	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	49	first strand
Strand 2	B	12	23	anti-parallel
Strand 3	B	26	33	anti-parallel
Strand 4	B	116	120	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	160	first strand
Strand 2	B	206	212	anti-parallel
Strand 3	B	192	200	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	44	first strand
Strand 2	C	26	33	anti-parallel
Strand 3	C	12	23	anti-parallel
Strand 4	C	92	100	parallel
Strand 5	C	74	81	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	49	first strand
Strand 2	C	12	23	anti-parallel
Strand 3	C	26	33	anti-parallel
Strand 4	C	116	120	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	160	first strand
Strand 2	C	205	212	anti-parallel
Strand 3	C	192	201	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	43	44	first strand
Strand 2	D	26	33	anti-parallel
Strand 3	D	12	23	anti-parallel
Strand 4	D	92	100	parallel
Strand 5	D	74	81	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	49	first strand
Strand 2	D	12	23	anti-parallel
Strand 3	D	26	33	anti-parallel
Strand 4	D	116	120	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	160	first strand
Strand 2	D	206	212	anti-parallel
Strand 3	D	192	200	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5BS6

Analysis of interatomic Contacts of Structural Units in PDB entry:
5BS6