Analysis of interatomic Contacts of Structural Units in PDB entry:
5BSA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BSA entry

There are 6 chains in PDB entry 5BSA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 60ARG 134
B
 LEU 60ALA 135
C
 GLN 27ARG 95
D
 ILE 26GLN 93
E
 ASP 607GLN 675
F
 PHE 604ASP 626
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5BSA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 79Right-handed alpha
Helix 2
AA2
A
86 114Right-handed alpha
Helix 3
AA3
A
120 132Right-handed alpha
Helix 4
AA4
B
67 78Right-handed alpha
Helix 5
AA5
B
87 114Right-handed alpha
Helix 6
AA6
B
120 132Right-handed alpha
Helix 7
AA7
C
30 41Right-handed alpha
Helix 8
AA8
C
49 75Right-handed alpha
Helix 9
AA9
C
83 90Right-handed alpha
Helix 10
AB1
D
30 41Right-handed alpha
Helix 11
AB2
D
48 76Right-handed alpha
Helix 12
AB3
D
83 92Right-handed alpha
Helix 13
AB4
E
618 624Right-handed alpha
Helix 14
AB5
E
645 650Right-handed alpha
Helix 15
AB6
E
653 663Right-handed alpha
Helix 16
AB7
F
616 624Right-handed alpha
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There are 3 sheets in PDB entry 5BSA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 119first strand
Strand 2
C
45 46parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 84first strand
Strand 2
D
80 81parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 119first strand
Strand 2
D
45 46parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il