Analysis of interatomic Contacts of Structural Units in PDB entry:
5BTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BTE entry

There are 6 chains in PDB entry 5BTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 VAL 2SER 371
D
 U 2 U 2
D
 U 5 U 7
C
 U 2 U 2
C
 U 5 U 7
A
 SER 5SER 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5BTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
49 54Right-handed alpha
Helix 2
AA2
B
68 73Right-handed alpha
Helix 3
AA3
B
80 95Right-handed alpha
Helix 4
AA4
B
106 115Right-handed alpha
Helix 5
AA5
B
120 123Right-handed 310
Helix 6
AA6
B
153 169Right-handed alpha
Helix 7
AA7
B
174 178Right-handed 310
Helix 8
AA8
B
179 184Right-handed alpha
Helix 9
AA9
B
229 231Right-handed 310
Helix 10
AB1
B
244 264Right-handed alpha
Helix 11
AB2
B
291 298Right-handed alpha
Helix 12
AB3
B
303 321Right-handed alpha
Helix 13
AB4
B
325 329Right-handed 310
Helix 14
AB5
B
349 355Right-handed alpha
Helix 15
AB6
B
360 369Right-handed alpha
Helix 16
AB7
A
49 54Right-handed alpha
Helix 17
AB8
A
68 73Right-handed alpha
Helix 18
AB9
A
80 95Right-handed alpha
Helix 19
AC1
A
106 115Right-handed alpha
Helix 20
AC2
A
120 123Right-handed 310
Helix 21
AC3
A
153 169Right-handed alpha
Helix 22
AC4
A
174 178Right-handed 310
Helix 23
AC5
A
179 184Right-handed alpha
Helix 24
AC6
A
229 231Right-handed 310
Helix 25
AC7
A
244 264Right-handed alpha
Helix 26
AC8
A
291 298Right-handed alpha
Helix 27
AC9
A
303 321Right-handed alpha
Helix 28
AD1
A
349 355Right-handed alpha
Helix 29
AD2
A
360 370Right-handed alpha
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There are 6 sheets in PDB entry 5BTE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 8first strand
Strand 2
B
341 347anti-parallel
Strand 3
B
332 338anti-parallel
Strand 4
B
125 131anti-parallel
Strand 5
B
134 139anti-parallel
Strand 6
B
102 105parallel
Strand 7
B
208 215parallel
Strand 8
B
196 205anti-parallel
Strand 9
B
22 30anti-parallel
Strand 10
B
34 37anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 46first strand
Strand 2
B
170 171anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
218 219first strand
Strand 2
B
233 240anti-parallel
Strand 3
B
269 275parallel
Strand 4
B
281 288anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
341 347anti-parallel
Strand 3
A
332 338anti-parallel
Strand 4
A
125 131anti-parallel
Strand 5
A
134 139anti-parallel
Strand 6
A
102 105parallel
Strand 7
A
208 215parallel
Strand 8
A
196 205anti-parallel
Strand 9
A
22 30anti-parallel
Strand 10
A
34 37anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
A
170 171anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
233 240anti-parallel
Strand 3
A
269 275parallel
Strand 4
A
281 288anti-parallel
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