Analysis of interatomic Contacts of Structural Units in PDB entry:
5BTO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BTO entry

There are 2 chains in PDB entry 5BTO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -6ILE 394
B
 MET 2ILE 394
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5BTO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 44Right-handed alpha
Helix 2
AA2
A
64 68Right-handed 310
Helix 3
AA3
A
72 76Right-handed 310
Helix 4
AA4
A
79 95Right-handed alpha
Helix 5
AA5
A
108 117Right-handed alpha
Helix 6
AA6
A
118 120Right-handed 310
Helix 7
AA7
A
141 160Right-handed alpha
Helix 8
AA8
A
161 182Right-handed alpha
Helix 9
AA9
A
187 191Right-handed 310
Helix 10
AB1
A
242 245Right-handed 310
Helix 11
AB2
A
258 280Right-handed alpha
Helix 12
AB3
A
305 312Right-handed alpha
Helix 13
AB4
A
325 344Right-handed alpha
Helix 14
AB5
A
370 379Right-handed alpha
Helix 15
AB6
A
384 394Right-handed alpha
Helix 16
AB7
B
36 44Right-handed alpha
Helix 17
AB8
B
51 55Right-handed 310
Helix 18
AB9
B
64 68Right-handed 310
Helix 19
AC1
B
72 76Right-handed 310
Helix 20
AC2
B
79 95Right-handed alpha
Helix 21
AC3
B
108 117Right-handed alpha
Helix 22
AC4
B
118 120Right-handed 310
Helix 23
AC5
B
141 160Right-handed alpha
Helix 24
AC6
B
161 182Right-handed alpha
Helix 25
AC7
B
187 191Right-handed 310
Helix 26
AC8
B
192 198Right-handed alpha
Helix 27
AC9
B
242 245Right-handed 310
Helix 28
AD1
B
258 280Right-handed alpha
Helix 29
AD2
B
305 310Right-handed alpha
Helix 30
AD3
B
325 344Right-handed alpha
Helix 31
AD4
B
370 379Right-handed alpha
Helix 32
AD5
B
384 394Right-handed alpha
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There are 5 sheets in PDB entry 5BTO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
363 368anti-parallel
Strand 3
A
352 358anti-parallel
Strand 4
A
125 132anti-parallel
Strand 5
A
135 140anti-parallel
Strand 6
A
104 107parallel
Strand 7
A
221 228parallel
Strand 8
A
209 218anti-parallel
Strand 9
A
20 27anti-parallel
Strand 10
A
33 34anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
183 184anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 232first strand
Strand 2
A
247 254anti-parallel
Strand 3
A
283 289parallel
Strand 4
A
295 302anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
364 368anti-parallel
Strand 3
B
352 357anti-parallel
Strand 4
B
125 132anti-parallel
Strand 5
B
135 140anti-parallel
Strand 6
B
104 107parallel
Strand 7
B
221 228parallel
Strand 8
B
209 218anti-parallel
Strand 9
B
20 27anti-parallel
Strand 10
B
33 34anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 184first strand
Strand 2
B
46 48anti-parallel
Strand 3
B
231 232parallel
Strand 4
B
247 254anti-parallel
Strand 5
B
283 289parallel
Strand 6
B
295 302anti-parallel
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