Analysis of interatomic Contacts of Structural Units in PDB entry:
5BTR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BTR entry

There are 6 chains in PDB entry 5BTR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 144TYR 658
B
 SER 142TYR 658
C
 ASP 144HIS 653
D
 ARG 1LYS 3
E
 ARG 1LYS 3
F
 ARG 1LYS 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 5BTR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
183 195Right-handed alpha
Helix 2
AA2
A
197 206Right-handed alpha
Helix 3
AA3
A
216 230Right-handed alpha
Helix 4
AA4
A
242 253Right-handed alpha
Helix 5
AA5
A
262 265Right-handed 310
Helix 6
AA6
A
278 287Right-handed alpha
Helix 7
AA7
A
292 297Right-handed 310
Helix 8
AA8
A
298 305Right-handed alpha
Helix 9
AA9
A
306 314Right-handed alpha
Helix 10
AB1
A
324 336Right-handed alpha
Helix 11
AB2
A
349 354Right-handed alpha
Helix 12
AB3
A
380 389Right-handed alpha
Helix 13
AB4
A
419 430Right-handed alpha
Helix 14
AB5
A
447 449Right-handed 310
Helix 15
AB6
A
450 455Right-handed alpha
Helix 16
AB7
A
481 494Right-handed alpha
Helix 17
AB8
A
494 499Right-handed alpha
Helix 18
AB9
B
183 195Right-handed alpha
Helix 19
AC1
B
197 206Right-handed alpha
Helix 20
AC2
B
216 230Right-handed alpha
Helix 21
AC3
B
242 253Right-handed alpha
Helix 22
AC4
B
262 265Right-handed 310
Helix 23
AC5
B
278 287Right-handed alpha
Helix 24
AC6
B
292 297Right-handed 310
Helix 25
AC7
B
298 305Right-handed alpha
Helix 26
AC8
B
306 317Right-handed alpha
Helix 27
AC9
B
324 336Right-handed alpha
Helix 28
AD1
B
349 354Right-handed alpha
Helix 29
AD2
B
380 389Right-handed alpha
Helix 30
AD3
B
419 430Right-handed alpha
Helix 31
AD4
B
447 449Right-handed 310
Helix 32
AD5
B
450 455Right-handed alpha
Helix 33
AD6
B
481 494Right-handed alpha
Helix 34
AD7
B
494 499Right-handed alpha
Helix 35
AD8
C
183 195Right-handed alpha
Helix 36
AD9
C
197 206Right-handed alpha
Helix 37
AE1
C
216 230Right-handed alpha
Helix 38
AE2
C
242 253Right-handed alpha
Helix 39
AE3
C
281 287Right-handed alpha
Helix 40
AE4
C
292 297Right-handed 310
Helix 41
AE5
C
298 305Right-handed alpha
Helix 42
AE6
C
306 314Right-handed alpha
Helix 43
AE7
C
317 321Right-handed 310
Helix 44
AE8
C
324 336Right-handed alpha
Helix 45
AE9
C
349 354Right-handed alpha
Helix 46
AF1
C
380 389Right-handed alpha
Helix 47
AF2
C
419 430Right-handed alpha
Helix 48
AF3
C
447 449Right-handed 310
Helix 49
AF4
C
450 455Right-handed alpha
Helix 50
AF5
C
481 494Right-handed alpha
Helix 51
AF6
C
495 500Right-handed alpha
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There are 9 sheets in PDB entry 5BTR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 153first strand
Strand 2
A
181 182parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 361first strand
Strand 2
A
339 344parallel
Strand 3
A
256 260parallel
Strand 4
A
435 439parallel
Strand 5
A
461 465parallel
Strand 6
A
476 479parallel
Strand 7
A
649 651parallel
Strand 8
A
643 645anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 379first strand
Strand 2
A
364 371anti-parallel
Strand 3
A
407 411anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 153first strand
Strand 2
B
181 182parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 361first strand
Strand 2
B
339 344parallel
Strand 3
B
256 260parallel
Strand 4
B
435 439parallel
Strand 5
B
461 465parallel
Strand 6
B
476 479parallel
Strand 7
B
649 651parallel
Strand 8
B
643 645anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
377 379first strand
Strand 2
B
364 371anti-parallel
Strand 3
B
407 411anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
152 153first strand
Strand 2
C
181 182parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
359 361first strand
Strand 2
C
339 344parallel
Strand 3
C
256 260parallel
Strand 4
C
435 439parallel
Strand 5
C
461 465parallel
Strand 6
C
476 479parallel
Strand 7
C
649 651parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
377 379first strand
Strand 2
C
364 371anti-parallel
Strand 3
C
407 411anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il