Analysis of interatomic Contacts of Structural Units in PDB entry:
5BU9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BU9 entry

There are 2 chains in PDB entry 5BU9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 71ALA 408
B
 ASN 70VAL 407
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 5BU9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 81Right-handed alpha
Helix 2
AA2
A
93 104Right-handed alpha
Helix 3
AA3
A
117 130Right-handed alpha
Helix 4
AA4
A
133 138Right-handed alpha
Helix 5
AA5
A
166 171Right-handed alpha
Helix 6
AA6
A
174 192Right-handed alpha
Helix 7
AA7
A
210 214Right-handed 310
Helix 8
AA8
A
217 221Right-handed 310
Helix 9
AA9
A
227 245Right-handed alpha
Helix 10
AB1
A
279 291Right-handed alpha
Helix 11
AB2
A
311 314Right-handed 310
Helix 12
AB3
A
315 320Right-handed alpha
Helix 13
AB4
A
341 345Right-handed 310
Helix 14
AB5
A
348 360Right-handed alpha
Helix 15
AB6
A
369 371Right-handed 310
Helix 16
AB7
A
372 387Right-handed alpha
Helix 17
AB8
A
387 405Right-handed alpha
Helix 18
AB9
B
74 82Right-handed alpha
Helix 19
AC1
B
93 104Right-handed alpha
Helix 20
AC2
B
117 131Right-handed alpha
Helix 21
AC3
B
133 138Right-handed alpha
Helix 22
AC4
B
166 171Right-handed alpha
Helix 23
AC5
B
174 192Right-handed alpha
Helix 24
AC6
B
210 214Right-handed 310
Helix 25
AC7
B
217 221Right-handed 310
Helix 26
AC8
B
227 245Right-handed alpha
Helix 27
AC9
B
279 291Right-handed alpha
Helix 28
AD1
B
311 314Right-handed 310
Helix 29
AD2
B
315 320Right-handed alpha
Helix 30
AD3
B
341 345Right-handed 310
Helix 31
AD4
B
348 360Right-handed alpha
Helix 32
AD5
B
369 371Right-handed 310
Helix 33
AD6
B
372 387Right-handed alpha
Helix 34
AD7
B
387 405Right-handed alpha
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There are 8 sheets in PDB entry 5BU9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 249first strand
Strand 2
A
196 197parallel
Strand 3
A
143 146parallel
Strand 4
A
107 111parallel
Strand 5
A
83 88parallel
Strand 6
A
364 366parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 150first strand
Strand 2
A
153 154anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 254first strand
Strand 2
A
295 298parallel
Strand 3
A
332 335parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 272first strand
Strand 2
A
302 303parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 249first strand
Strand 2
B
196 197parallel
Strand 3
B
143 146parallel
Strand 4
B
107 111parallel
Strand 5
B
83 88parallel
Strand 6
B
364 366parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 150first strand
Strand 2
B
153 154anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
251 254first strand
Strand 2
B
295 298parallel
Strand 3
B
332 335parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 272first strand
Strand 2
B
302 303parallel
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