Analysis of interatomic Contacts of Structural Units in PDB entry:
5BUZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BUZ entry

There are 4 chains in PDB entry 5BUZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5LYS 658
B
 SER 505GLY 828
C
 GLU 188GLU 225
D
 ALA 5ARG 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are109 helices in PDB entry 5BUZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 27Right-handed alpha
Helix 2
AA2
A
36 44Right-handed alpha
Helix 3
AA3
A
48 55Right-handed alpha
Helix 4
AA4
A
64 66Right-handed 310
Helix 5
AA5
A
83 97Right-handed alpha
Helix 6
AA6
A
116 125Right-handed alpha
Helix 7
AA7
A
155 162Right-handed alpha
Helix 8
AA8
A
166 184Right-handed alpha
Helix 9
AA9
A
193 216Right-handed alpha
Helix 10
AB1
A
239 241Right-handed 310
Helix 11
AB2
A
242 247Right-handed alpha
Helix 12
AB3
A
251 260Right-handed alpha
Helix 13
AB4
A
306 314Right-handed alpha
Helix 14
AB5
A
316 318Right-handed 310
Helix 15
AB6
A
319 336Right-handed alpha
Helix 16
AB7
A
343 353Right-handed alpha
Helix 17
AB8
A
353 378Right-handed alpha
Helix 18
AB9
A
380 396Right-handed alpha
Helix 19
AC1
A
398 401Right-handed 310
Helix 20
AC2
A
402 412Right-handed alpha
Helix 21
AC3
A
415 431Right-handed alpha
Helix 22
AC4
A
434 450Right-handed alpha
Helix 23
AC5
A
452 463Right-handed alpha
Helix 24
AC6
A
471 475Right-handed 310
Helix 25
AC7
A
491 499Right-handed alpha
Helix 26
AC8
A
513 517Right-handed 310
Helix 27
AC9
A
523 534Right-handed alpha
Helix 28
AD1
A
534 541Right-handed alpha
Helix 29
AD2
A
565 570Right-handed alpha
Helix 30
AD3
A
613 627Right-handed alpha
Helix 31
AD4
A
642 649Right-handed alpha
Helix 32
AD5
B
506 523Right-handed alpha
Helix 33
AD6
B
524 526Right-handed 310
Helix 34
AD7
B
531 542Right-handed alpha
Helix 35
AD8
B
544 556Right-handed alpha
Helix 36
AD9
B
557 572Right-handed alpha
Helix 37
AE1
B
573 584Right-handed alpha
Helix 38
AE2
B
584 595Right-handed alpha
Helix 39
AE3
B
605 616Right-handed alpha
Helix 40
AE4
B
618 633Right-handed alpha
Helix 41
AE5
B
635 651Right-handed alpha
Helix 42
AE6
B
657 682Right-handed alpha
Helix 43
AE7
B
689 700Right-handed alpha
Helix 44
AE8
B
702 713Right-handed alpha
Helix 45
AE9
B
716 732Right-handed alpha
Helix 46
AF1
B
733 741Right-handed alpha
Helix 47
AF2
B
750 759Right-handed alpha
Helix 48
AF3
B
762 768Right-handed alpha
Helix 49
AF4
B
780 788Right-handed alpha
Helix 50
AF5
B
790 801Right-handed alpha
Helix 51
AF6
B
803 815Right-handed alpha
Helix 52
AF7
B
821 827Right-handed alpha
Helix 53
AF8
C
191 213Right-handed alpha
Helix 54
AF9
C
220 224Right-handed 310
Helix 55
AG1
D
8 27Right-handed alpha
Helix 56
AG2
D
36 44Right-handed alpha
Helix 57
AG3
D
48 55Right-handed alpha
Helix 58
AG4
D
64 66Right-handed 310
Helix 59
AG5
D
83 97Right-handed alpha
Helix 60
AG6
D
116 125Right-handed alpha
Helix 61
AG7
D
155 162Right-handed alpha
Helix 62
AG8
D
166 184Right-handed alpha
Helix 63
AG9
D
193 216Right-handed alpha
Helix 64
AH1
D
239 241Right-handed 310
Helix 65
AH2
D
242 247Right-handed alpha
Helix 66
AH3
D
251 260Right-handed alpha
Helix 67
AH4
D
306 314Right-handed alpha
Helix 68
AH5
D
316 318Right-handed 310
Helix 69
AH6
D
319 336Right-handed alpha
Helix 70
AH7
D
343 353Right-handed alpha
Helix 71
AH8
D
353 378Right-handed alpha
Helix 72
AH9
D
380 396Right-handed alpha
Helix 73
AI1
D
398 401Right-handed 310
Helix 74
AI2
D
402 412Right-handed alpha
Helix 75
AI3
D
415 431Right-handed alpha
Helix 76
AI4
D
434 450Right-handed alpha
Helix 77
AI5
D
452 463Right-handed alpha
Helix 78
AI6
D
471 475Right-handed 310
Helix 79
AI7
D
491 499Right-handed alpha
Helix 80
AI8
D
513 517Right-handed 310
Helix 81
AI9
D
523 534Right-handed alpha
Helix 82
AJ1
D
534 541Right-handed alpha
Helix 83
AJ2
D
565 570Right-handed alpha
Helix 84
AJ3
D
613 627Right-handed alpha
Helix 85
AJ4
D
642 649Right-handed alpha
Helix 86
AJ5
E
506 523Right-handed alpha
Helix 87
AJ6
E
531 542Right-handed alpha
Helix 88
AJ7
E
546 556Right-handed alpha
Helix 89
AJ8
E
557 572Right-handed alpha
Helix 90
AJ9
E
573 584Right-handed alpha
Helix 91
AK1
E
584 595Right-handed alpha
Helix 92
AK2
E
605 616Right-handed alpha
Helix 93
AK3
E
618 633Right-handed alpha
Helix 94
AK4
E
635 651Right-handed alpha
Helix 95
AK5
E
657 682Right-handed alpha
Helix 96
AK6
E
689 700Right-handed alpha
Helix 97
AK7
E
702 713Right-handed alpha
Helix 98
AK8
E
716 732Right-handed alpha
Helix 99
AK9
E
733 741Right-handed alpha
Helix 100
AL1
E
750 759Right-handed alpha
Helix 101
AL2
E
762 768Right-handed alpha
Helix 102
AL3
E
780 788Right-handed alpha
Helix 103
AL4
E
790 801Right-handed alpha
Helix 104
AL5
E
803 815Right-handed alpha
Helix 105
AL6
E
821 826Right-handed alpha
Helix 106
AL7
E
827 828Right-handed 310
Helix 107
AL8
F
186 186Right-handed 310
Helix 108
AL9
F
187 213Right-handed alpha
Helix 109
AM1
F
220 224Right-handed 310
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There are 6 sheets in PDB entry 5BUZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 62first strand
Strand 2
A
31 35parallel
Strand 3
A
74 80parallel
Strand 4
A
106 112parallel
Strand 5
A
133 136parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 145first strand
Strand 2
A
148 150anti-parallel
Strand 3
A
631 637parallel
Strand 4
A
602 609parallel
Strand 5
A
230 237parallel
Strand 6
A
188 192parallel
Strand 7
A
576 580anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 269first strand
Strand 2
A
298 301anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 62first strand
Strand 2
D
31 35parallel
Strand 3
D
74 80parallel
Strand 4
D
106 112parallel
Strand 5
D
133 136parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
142 145first strand
Strand 2
D
148 150anti-parallel
Strand 3
D
631 637parallel
Strand 4
D
602 609parallel
Strand 5
D
230 237parallel
Strand 6
D
188 192parallel
Strand 7
D
576 580anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
266 269first strand
Strand 2
D
298 301anti-parallel
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