Analysis of interatomic Contacts of Structural Units in PDB entry:
5BV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BV0 entry

There are 3 chains in PDB entry 5BV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5THR 659
B
 GLU 524ALA 730
C
 UNK 165ARG 202
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 5BV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 27Right-handed alpha
Helix 2
AA2
A
36 44Right-handed alpha
Helix 3
AA3
A
48 55Right-handed alpha
Helix 4
AA4
A
64 66Right-handed 310
Helix 5
AA5
A
83 96Right-handed alpha
Helix 6
AA6
A
116 125Right-handed alpha
Helix 7
AA7
A
155 162Right-handed alpha
Helix 8
AA8
A
166 184Right-handed alpha
Helix 9
AA9
A
193 216Right-handed alpha
Helix 10
AB1
A
239 241Right-handed 310
Helix 11
AB2
A
242 247Right-handed alpha
Helix 12
AB3
A
251 260Right-handed alpha
Helix 13
AB4
A
306 314Right-handed alpha
Helix 14
AB5
A
316 318Right-handed 310
Helix 15
AB6
A
319 336Right-handed alpha
Helix 16
AB7
A
344 349Right-handed alpha
Helix 17
AB8
A
354 379Right-handed alpha
Helix 18
AB9
A
380 396Right-handed alpha
Helix 19
AC1
A
398 401Right-handed 310
Helix 20
AC2
A
402 412Right-handed alpha
Helix 21
AC3
A
415 430Right-handed alpha
Helix 22
AC4
A
434 450Right-handed alpha
Helix 23
AC5
A
453 463Right-handed alpha
Helix 24
AC6
A
491 499Right-handed alpha
Helix 25
AC7
A
513 517Right-handed 310
Helix 26
AC8
A
523 534Right-handed alpha
Helix 27
AC9
A
534 541Right-handed alpha
Helix 28
AD1
A
565 570Right-handed alpha
Helix 29
AD2
A
613 627Right-handed alpha
Helix 30
AD3
A
642 649Right-handed alpha
Helix 31
AD4
B
534 542Right-handed alpha
Helix 32
AD5
B
546 556Right-handed alpha
Helix 33
AD6
B
557 572Right-handed alpha
Helix 34
AD7
B
573 584Right-handed alpha
Helix 35
AD8
B
584 595Right-handed alpha
Helix 36
AD9
B
605 615Right-handed alpha
Helix 37
AE1
B
618 631Right-handed alpha
Helix 38
AE2
B
635 651Right-handed alpha
Helix 39
AE3
B
657 682Right-handed alpha
Helix 40
AE4
B
689 700Right-handed alpha
Helix 41
AE5
B
702 713Right-handed alpha
Helix 42
AE6
B
716 729Right-handed alpha
Helix 43
AE7
C
166 179Right-handed alpha
Helix 44
AE8
C
184 196Right-handed alpha
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There are 3 sheets in PDB entry 5BV0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 62first strand
Strand 2
A
31 35parallel
Strand 3
A
74 80parallel
Strand 4
A
107 112parallel
Strand 5
A
132 136parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 145first strand
Strand 2
A
148 150anti-parallel
Strand 3
A
631 637parallel
Strand 4
A
602 609parallel
Strand 5
A
230 237parallel
Strand 6
A
188 192parallel
Strand 7
A
576 580anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 269first strand
Strand 2
A
298 301anti-parallel
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