Analysis of interatomic Contacts of Structural Units in PDB entry:
5BW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BW8 entry

There are 5 chains in PDB entry 5BW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4ASP 352
B
 LEU 3GLU 354
C
 ALA 11LEU 293
D
 THR 3LYS 53
Z
 UNK 1UNK 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 5BW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 14Right-handed alpha
Helix 2
AA2
A
30 46Right-handed alpha
Helix 3
AA3
A
60 67Right-handed alpha
Helix 4
AA4
A
89 97Right-handed alpha
Helix 5
AA5
A
128 133Right-handed alpha
Helix 6
AA6
A
135 155Right-handed alpha
Helix 7
AA7
A
174 177Right-handed 310
Helix 8
AA8
A
178 195Right-handed alpha
Helix 9
AA9
A
199 206Right-handed alpha
Helix 10
AB1
A
208 231Right-handed alpha
Helix 11
AB2
A
245 262Right-handed alpha
Helix 12
AB3
A
276 280Right-handed 310
Helix 13
AB4
A
285 306Right-handed alpha
Helix 14
AB5
A
323 336Right-handed alpha
Helix 15
AB6
A
339 352Right-handed alpha
Helix 16
AB7
B
9 14Right-handed alpha
Helix 17
AB8
B
30 46Right-handed alpha
Helix 18
AB9
B
60 67Right-handed alpha
Helix 19
AC1
B
89 100Right-handed alpha
Helix 20
AC2
B
135 155Right-handed alpha
Helix 21
AC3
B
174 177Right-handed 310
Helix 22
AC4
B
178 190Right-handed alpha
Helix 23
AC5
B
212 231Right-handed alpha
Helix 24
AC6
B
245 262Right-handed alpha
Helix 25
AC7
B
276 281Right-handed alpha
Helix 26
AC8
B
285 306Right-handed alpha
Helix 27
AC9
B
323 336Right-handed alpha
Helix 28
AD1
B
339 354Right-handed alpha
Helix 29
AD2
C
12 26Right-handed alpha
Helix 30
AD3
C
28 46Right-handed alpha
Helix 31
AD4
C
48 66Right-handed alpha
Helix 32
AD5
C
68 86Right-handed alpha
Helix 33
AD6
C
91 105Right-handed alpha
Helix 34
AD7
C
111 126Right-handed alpha
Helix 35
AD8
C
133 147Right-handed alpha
Helix 36
AD9
C
149 159Right-handed alpha
Helix 37
AE1
C
161 179Right-handed alpha
Helix 38
AE2
C
184 201Right-handed alpha
Helix 39
AE3
C
203 223Right-handed alpha
Helix 40
AE4
C
242 258Right-handed alpha
Helix 41
AE5
C
259 270Right-handed alpha
Helix 42
AE6
C
270 277Right-handed alpha
Helix 43
AE7
C
277 288Right-handed alpha
Helix 44
AE8
D
3 5Right-handed 310
Helix 45
AE9
D
6 21Right-handed alpha
Helix 46
AF1
D
34 38Right-handed 310
Helix 47
AF2
Z
5 13Right-handed alpha
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There are 3 sheets in PDB entry 5BW8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
83 87anti-parallel
Strand 3
A
51 55parallel
Strand 4
A
162 166parallel
Strand 5
A
20 24parallel
Strand 6
A
236 243parallel
Strand 7
A
268 274parallel
Strand 8
A
310 315parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
83 87anti-parallel
Strand 3
B
51 55parallel
Strand 4
B
162 166parallel
Strand 5
B
20 24parallel
Strand 6
B
236 243parallel
Strand 7
B
268 274parallel
Strand 8
B
310 315parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
226 231first strand
Strand 2
C
234 239anti-parallel
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