Analysis of interatomic Contacts of Structural Units in PDB entry:
5BWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BWF entry

There are 2 chains in PDB entry 5BWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -6LYS 464
B
 LEU -6LYS 464
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 5BWF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 18Right-handed alpha
Helix 2
AA2
A
22 26Right-handed 310
Helix 3
AA3
A
29 35Right-handed alpha
Helix 4
AA4
A
56 67Right-handed alpha
Helix 5
AA5
A
77 82Right-handed alpha
Helix 6
AA6
A
92 109Right-handed alpha
Helix 7
AA7
A
123 131Right-handed alpha
Helix 8
AA8
A
132 135Right-handed 310
Helix 9
AA9
A
137 154Right-handed alpha
Helix 10
AB1
A
165 175Right-handed alpha
Helix 11
AB2
A
187 211Right-handed alpha
Helix 12
AB3
A
212 215Right-handed 310
Helix 13
AB4
A
235 250Right-handed alpha
Helix 14
AB5
A
250 259Right-handed alpha
Helix 15
AB6
A
263 271Right-handed alpha
Helix 16
AB7
A
272 274Right-handed 310
Helix 17
AB8
A
278 286Right-handed alpha
Helix 18
AB9
A
342 357Right-handed alpha
Helix 19
AC1
A
373 377Right-handed 310
Helix 20
AC2
A
378 383Right-handed alpha
Helix 21
AC3
A
385 405Right-handed alpha
Helix 22
AC4
A
423 427Right-handed 310
Helix 23
AC5
A
448 462Right-handed alpha
Helix 24
AC6
B
13 18Right-handed alpha
Helix 25
AC7
B
22 26Right-handed 310
Helix 26
AC8
B
29 35Right-handed alpha
Helix 27
AC9
B
52 55Right-handed 310
Helix 28
AD1
B
56 67Right-handed alpha
Helix 29
AD2
B
77 82Right-handed alpha
Helix 30
AD3
B
92 109Right-handed alpha
Helix 31
AD4
B
123 131Right-handed alpha
Helix 32
AD5
B
132 135Right-handed 310
Helix 33
AD6
B
137 154Right-handed alpha
Helix 34
AD7
B
165 175Right-handed alpha
Helix 35
AD8
B
187 211Right-handed alpha
Helix 36
AD9
B
212 215Right-handed 310
Helix 37
AE1
B
235 250Right-handed alpha
Helix 38
AE2
B
250 259Right-handed alpha
Helix 39
AE3
B
263 271Right-handed alpha
Helix 40
AE4
B
272 274Right-handed 310
Helix 41
AE5
B
278 286Right-handed alpha
Helix 42
AE6
B
342 357Right-handed alpha
Helix 43
AE7
B
373 377Right-handed 310
Helix 44
AE8
B
378 383Right-handed alpha
Helix 45
AE9
B
385 405Right-handed alpha
Helix 46
AF1
B
423 427Right-handed 310
Helix 47
AF2
B
450 452Right-handed 310
Helix 48
AF3
B
453 462Right-handed alpha
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There are 6 sheets in PDB entry 5BWF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 11first strand
Strand 2
A
71 75parallel
Strand 3
A
112 118parallel
Strand 4
A
159 164parallel
Strand 5
A
218 224parallel
Strand 6
A
292 295parallel
Strand 7
A
362 367parallel
Strand 8
A
410 416parallel
Strand 9
A
7 11parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 230first strand
Strand 2
A
299 304parallel
Strand 3
A
318 321anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 438first strand
Strand 2
A
444 447anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 11first strand
Strand 2
B
71 75parallel
Strand 3
B
112 118parallel
Strand 4
B
159 164parallel
Strand 5
B
218 224parallel
Strand 6
B
292 295parallel
Strand 7
B
362 367parallel
Strand 8
B
410 416parallel
Strand 9
B
7 11parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 230first strand
Strand 2
B
299 304parallel
Strand 3
B
318 321anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
435 438first strand
Strand 2
B
444 447anti-parallel
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