Analysis of interatomic Contacts of Structural Units in PDB entry:
5BWK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5BWK entry

There are 24 chains in PDB entry 5BWK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	GLU 351
B	VAL 5	GLU 351
D	VAL 5	GLU 351
E	MET 9	PHE 299
F	THR 3	ARG 56
G	MET 9	PHE 299
H	THR 3	ARG 56
I	MET 9	PHE 299
J	THR 3	ARG 56
K	MET 9	PHE 299
L	THR 3	ARG 56
M	VAL 5	GLU 351
N	VAL 5	GLU 351
O	VAL 5	GLU 351
P	VAL 5	GLU 351
Q	MET 9	PHE 299
R	THR 3	ARG 56
S	MET 9	PHE 299
T	THR 3	ARG 56
U	MET 9	PHE 299
V	THR 3	ARG 56
W	MET 9	PHE 299
X	THR 3	ARG 56
C	VAL 5	GLU 351

There are227 helices in PDB entry 5BWK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	14	Right-handed alpha
Helix 2	AA2	A	30	46	Right-handed alpha
Helix 3	AA3	A	60	67	Right-handed alpha
Helix 4	AA4	A	135	153	Right-handed alpha
Helix 5	AA5	A	174	177	Right-handed 310
Helix 6	AA6	A	178	194	Right-handed alpha
Helix 7	AA7	A	213	230	Right-handed alpha
Helix 8	AA8	A	245	262	Right-handed alpha
Helix 9	AA9	A	285	306	Right-handed alpha
Helix 10	AB1	A	323	332	Right-handed alpha
Helix 11	AB2	A	333	335	Right-handed 310
Helix 12	AB3	A	343	351	Right-handed alpha
Helix 13	AB4	B	9	14	Right-handed alpha
Helix 14	AB5	B	30	46	Right-handed alpha
Helix 15	AB6	B	60	67	Right-handed alpha
Helix 16	AB7	B	135	153	Right-handed alpha
Helix 17	AB8	B	174	177	Right-handed 310
Helix 18	AB9	B	178	194	Right-handed alpha
Helix 19	AC1	B	213	231	Right-handed alpha
Helix 20	AC2	B	245	262	Right-handed alpha
Helix 21	AC3	B	285	306	Right-handed alpha
Helix 22	AC4	B	323	332	Right-handed alpha
Helix 23	AC5	B	333	335	Right-handed 310
Helix 24	AC6	B	343	351	Right-handed alpha
Helix 25	AC7	D	9	14	Right-handed alpha
Helix 26	AC8	D	30	46	Right-handed alpha
Helix 27	AC9	D	60	67	Right-handed alpha
Helix 28	AD1	D	135	152	Right-handed alpha
Helix 29	AD2	D	174	177	Right-handed 310
Helix 30	AD3	D	178	194	Right-handed alpha
Helix 31	AD4	D	213	230	Right-handed alpha
Helix 32	AD5	D	245	262	Right-handed alpha
Helix 33	AD6	D	285	306	Right-handed alpha
Helix 34	AD7	D	323	332	Right-handed alpha
Helix 35	AD8	D	333	335	Right-handed 310
Helix 36	AD9	D	343	351	Right-handed alpha
Helix 37	AE1	E	10	25	Right-handed alpha
Helix 38	AE2	E	28	46	Right-handed alpha
Helix 39	AE3	E	48	66	Right-handed alpha
Helix 40	AE4	E	68	86	Right-handed alpha
Helix 41	AE5	E	91	104	Right-handed alpha
Helix 42	AE6	E	111	126	Right-handed alpha
Helix 43	AE7	E	133	147	Right-handed alpha
Helix 44	AE8	E	149	159	Right-handed alpha
Helix 45	AE9	E	161	179	Right-handed alpha
Helix 46	AF1	E	185	201	Right-handed alpha
Helix 47	AF2	E	203	222	Right-handed alpha
Helix 48	AF3	E	242	258	Right-handed alpha
Helix 49	AF4	E	259	270	Right-handed alpha
Helix 50	AF5	E	270	277	Right-handed alpha
Helix 51	AF6	E	277	288	Right-handed alpha
Helix 52	AF7	F	6	21	Right-handed alpha
Helix 53	AF8	G	10	25	Right-handed alpha
Helix 54	AF9	G	28	46	Right-handed alpha
Helix 55	AG1	G	48	66	Right-handed alpha
Helix 56	AG2	G	68	86	Right-handed alpha
Helix 57	AG3	G	91	105	Right-handed alpha
Helix 58	AG4	G	111	126	Right-handed alpha
Helix 59	AG5	G	133	147	Right-handed alpha
Helix 60	AG6	G	149	159	Right-handed alpha
Helix 61	AG7	G	161	179	Right-handed alpha
Helix 62	AG8	G	185	201	Right-handed alpha
Helix 63	AG9	G	203	223	Right-handed alpha
Helix 64	AH1	G	242	258	Right-handed alpha
Helix 65	AH2	G	259	270	Right-handed alpha
Helix 66	AH3	G	270	277	Right-handed alpha
Helix 67	AH4	G	277	288	Right-handed alpha
Helix 68	AH5	H	6	21	Right-handed alpha
Helix 69	AH6	I	10	25	Right-handed alpha
Helix 70	AH7	I	28	46	Right-handed alpha
Helix 71	AH8	I	48	66	Right-handed alpha
Helix 72	AH9	I	68	86	Right-handed alpha
Helix 73	AI1	I	91	105	Right-handed alpha
Helix 74	AI2	I	111	126	Right-handed alpha
Helix 75	AI3	I	133	147	Right-handed alpha
Helix 76	AI4	I	149	159	Right-handed alpha
Helix 77	AI5	I	161	179	Right-handed alpha
Helix 78	AI6	I	185	201	Right-handed alpha
Helix 79	AI7	I	203	223	Right-handed alpha
Helix 80	AI8	I	242	258	Right-handed alpha
Helix 81	AI9	I	259	270	Right-handed alpha
Helix 82	AJ1	I	270	277	Right-handed alpha
Helix 83	AJ2	I	277	288	Right-handed alpha
Helix 84	AJ3	J	6	21	Right-handed alpha
Helix 85	AJ4	K	10	26	Right-handed alpha
Helix 86	AJ5	K	28	46	Right-handed alpha
Helix 87	AJ6	K	48	66	Right-handed alpha
Helix 88	AJ7	K	68	86	Right-handed alpha
Helix 89	AJ8	K	91	105	Right-handed alpha
Helix 90	AJ9	K	111	126	Right-handed alpha
Helix 91	AK1	K	133	147	Right-handed alpha
Helix 92	AK2	K	149	159	Right-handed alpha
Helix 93	AK3	K	161	179	Right-handed alpha
Helix 94	AK4	K	185	201	Right-handed alpha
Helix 95	AK5	K	203	222	Right-handed alpha
Helix 96	AK6	K	242	258	Right-handed alpha
Helix 97	AK7	K	259	270	Right-handed alpha
Helix 98	AK8	K	270	277	Right-handed alpha
Helix 99	AK9	K	277	288	Right-handed alpha
Helix 100	AL1	L	6	21	Right-handed alpha
Helix 101	AL2	L	34	38	Right-handed 310
Helix 102	AL3	M	9	14	Right-handed alpha
Helix 103	AL4	M	30	46	Right-handed alpha
Helix 104	AL5	M	60	67	Right-handed alpha
Helix 105	AL6	M	135	153	Right-handed alpha
Helix 106	AL7	M	174	177	Right-handed 310
Helix 107	AL8	M	178	194	Right-handed alpha
Helix 108	AL9	M	213	230	Right-handed alpha
Helix 109	AM1	M	245	262	Right-handed alpha
Helix 110	AM2	M	285	306	Right-handed alpha
Helix 111	AM3	M	323	332	Right-handed alpha
Helix 112	AM4	M	333	335	Right-handed 310
Helix 113	AM5	M	343	351	Right-handed alpha
Helix 114	AM6	N	9	14	Right-handed alpha
Helix 115	AM7	N	30	46	Right-handed alpha
Helix 116	AM8	N	60	67	Right-handed alpha
Helix 117	AM9	N	135	153	Right-handed alpha
Helix 118	AN1	N	174	177	Right-handed 310
Helix 119	AN2	N	178	194	Right-handed alpha
Helix 120	AN3	N	213	230	Right-handed alpha
Helix 121	AN4	N	245	262	Right-handed alpha
Helix 122	AN5	N	285	306	Right-handed alpha
Helix 123	AN6	N	323	332	Right-handed alpha
Helix 124	AN7	N	333	335	Right-handed 310
Helix 125	AN8	N	343	351	Right-handed alpha
Helix 126	AN9	O	9	14	Right-handed alpha
Helix 127	AO1	O	30	46	Right-handed alpha
Helix 128	AO2	O	60	67	Right-handed alpha
Helix 129	AO3	O	135	152	Right-handed alpha
Helix 130	AO4	O	174	177	Right-handed 310
Helix 131	AO5	O	178	194	Right-handed alpha
Helix 132	AO6	O	213	230	Right-handed alpha
Helix 133	AO7	O	245	262	Right-handed alpha
Helix 134	AO8	O	285	306	Right-handed alpha
Helix 135	AO9	O	323	332	Right-handed alpha
Helix 136	AP1	O	333	335	Right-handed 310
Helix 137	AP2	O	343	351	Right-handed alpha
Helix 138	AP3	P	9	14	Right-handed alpha
Helix 139	AP4	P	30	46	Right-handed alpha
Helix 140	AP5	P	60	67	Right-handed alpha
Helix 141	AP6	P	135	152	Right-handed alpha
Helix 142	AP7	P	174	177	Right-handed 310
Helix 143	AP8	P	178	194	Right-handed alpha
Helix 144	AP9	P	199	205	Right-handed alpha
Helix 145	AQ1	P	213	230	Right-handed alpha
Helix 146	AQ2	P	245	261	Right-handed alpha
Helix 147	AQ3	P	285	306	Right-handed alpha
Helix 148	AQ4	P	323	332	Right-handed alpha
Helix 149	AQ5	P	333	335	Right-handed 310
Helix 150	AQ6	P	343	351	Right-handed alpha
Helix 151	AQ7	Q	10	25	Right-handed alpha
Helix 152	AQ8	Q	28	46	Right-handed alpha
Helix 153	AQ9	Q	48	66	Right-handed alpha
Helix 154	AR1	Q	68	86	Right-handed alpha
Helix 155	AR2	Q	91	105	Right-handed alpha
Helix 156	AR3	Q	111	126	Right-handed alpha
Helix 157	AR4	Q	133	147	Right-handed alpha
Helix 158	AR5	Q	149	159	Right-handed alpha
Helix 159	AR6	Q	161	179	Right-handed alpha
Helix 160	AR7	Q	185	201	Right-handed alpha
Helix 161	AR8	Q	203	222	Right-handed alpha
Helix 162	AR9	Q	242	258	Right-handed alpha
Helix 163	AS1	Q	259	270	Right-handed alpha
Helix 164	AS2	Q	270	277	Right-handed alpha
Helix 165	AS3	Q	277	288	Right-handed alpha
Helix 166	AS4	R	6	21	Right-handed alpha
Helix 167	AS5	S	10	25	Right-handed alpha
Helix 168	AS6	S	28	46	Right-handed alpha
Helix 169	AS7	S	48	66	Right-handed alpha
Helix 170	AS8	S	68	86	Right-handed alpha
Helix 171	AS9	S	91	104	Right-handed alpha
Helix 172	AT1	S	111	126	Right-handed alpha
Helix 173	AT2	S	133	147	Right-handed alpha
Helix 174	AT3	S	149	159	Right-handed alpha
Helix 175	AT4	S	161	179	Right-handed alpha
Helix 176	AT5	S	185	201	Right-handed alpha
Helix 177	AT6	S	203	222	Right-handed alpha
Helix 178	AT7	S	242	258	Right-handed alpha
Helix 179	AT8	S	259	270	Right-handed alpha
Helix 180	AT9	S	270	277	Right-handed alpha
Helix 181	AU1	S	277	288	Right-handed alpha
Helix 182	AU2	T	6	21	Right-handed alpha
Helix 183	AU3	U	10	25	Right-handed alpha
Helix 184	AU4	U	28	46	Right-handed alpha
Helix 185	AU5	U	48	66	Right-handed alpha
Helix 186	AU6	U	68	86	Right-handed alpha
Helix 187	AU7	U	91	105	Right-handed alpha
Helix 188	AU8	U	111	126	Right-handed alpha
Helix 189	AU9	U	133	147	Right-handed alpha
Helix 190	AV1	U	149	159	Right-handed alpha
Helix 191	AV2	U	161	179	Right-handed alpha
Helix 192	AV3	U	185	201	Right-handed alpha
Helix 193	AV4	U	203	222	Right-handed alpha
Helix 194	AV5	U	242	258	Right-handed alpha
Helix 195	AV6	U	259	270	Right-handed alpha
Helix 196	AV7	U	270	277	Right-handed alpha
Helix 197	AV8	U	277	288	Right-handed alpha
Helix 198	AV9	V	6	21	Right-handed alpha
Helix 199	AW1	W	10	25	Right-handed alpha
Helix 200	AW2	W	28	46	Right-handed alpha
Helix 201	AW3	W	48	66	Right-handed alpha
Helix 202	AW4	W	68	86	Right-handed alpha
Helix 203	AW5	W	91	104	Right-handed alpha
Helix 204	AW6	W	111	126	Right-handed alpha
Helix 205	AW7	W	133	147	Right-handed alpha
Helix 206	AW8	W	149	159	Right-handed alpha
Helix 207	AW9	W	161	179	Right-handed alpha
Helix 208	AX1	W	185	201	Right-handed alpha
Helix 209	AX2	W	203	222	Right-handed alpha
Helix 210	AX3	W	242	258	Right-handed alpha
Helix 211	AX4	W	259	270	Right-handed alpha
Helix 212	AX5	W	270	277	Right-handed alpha
Helix 213	AX6	W	277	288	Right-handed alpha
Helix 214	AX7	X	6	21	Right-handed alpha
Helix 215	AX8	X	34	38	Right-handed 310
Helix 216	AX9	C	9	14	Right-handed alpha
Helix 217	AY1	C	30	46	Right-handed alpha
Helix 218	AY2	C	60	67	Right-handed alpha
Helix 219	AY3	C	135	153	Right-handed alpha
Helix 220	AY4	C	174	177	Right-handed 310
Helix 221	AY5	C	178	194	Right-handed alpha
Helix 222	AY6	C	213	231	Right-handed alpha
Helix 223	AY7	C	245	262	Right-handed alpha
Helix 224	AY8	C	285	306	Right-handed alpha
Helix 225	AY9	C	323	332	Right-handed alpha
Helix 226	AZ1	C	333	335	Right-handed 310
Helix 227	AZ2	C	343	351	Right-handed alpha

There are 16 sheets in PDB entry 5BWK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	76	first strand
Strand 2	A	83	87	anti-parallel
Strand 3	A	51	55	parallel
Strand 4	A	162	166	parallel
Strand 5	A	20	24	parallel
Strand 6	A	236	242	parallel
Strand 7	A	266	274	parallel
Strand 8	A	310	315	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	76	first strand
Strand 2	B	83	87	anti-parallel
Strand 3	B	51	55	parallel
Strand 4	B	162	166	parallel
Strand 5	B	20	24	parallel
Strand 6	B	236	242	parallel
Strand 7	B	266	274	parallel
Strand 8	B	310	315	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	76	first strand
Strand 2	D	83	87	anti-parallel
Strand 3	D	51	55	parallel
Strand 4	D	162	166	parallel
Strand 5	D	20	24	parallel
Strand 6	D	236	242	parallel
Strand 7	D	266	274	parallel
Strand 8	D	310	315	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	226	231	first strand
Strand 2	E	234	239	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	226	231	first strand
Strand 2	G	234	239	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	226	231	first strand
Strand 2	I	234	239	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	226	231	first strand
Strand 2	K	234	239	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	75	76	first strand
Strand 2	M	83	87	anti-parallel
Strand 3	M	51	55	parallel
Strand 4	M	162	166	parallel
Strand 5	M	20	24	parallel
Strand 6	M	236	242	parallel
Strand 7	M	266	274	parallel
Strand 8	M	310	315	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	75	76	first strand
Strand 2	N	83	87	anti-parallel
Strand 3	N	51	55	parallel
Strand 4	N	162	166	parallel
Strand 5	N	20	24	parallel
Strand 6	N	236	242	parallel
Strand 7	N	266	274	parallel
Strand 8	N	310	315	parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	75	76	first strand
Strand 2	O	83	87	anti-parallel
Strand 3	O	51	55	parallel
Strand 4	O	162	166	parallel
Strand 5	O	20	24	parallel
Strand 6	O	236	242	parallel
Strand 7	O	266	274	parallel
Strand 8	O	310	315	parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	75	76	first strand
Strand 2	P	83	87	anti-parallel
Strand 3	P	51	55	parallel
Strand 4	P	162	166	parallel
Strand 5	P	20	24	parallel
Strand 6	P	236	242	parallel
Strand 7	P	266	274	parallel
Strand 8	P	310	315	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	226	231	first strand
Strand 2	Q	234	239	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	226	231	first strand
Strand 2	S	234	239	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	226	231	first strand
Strand 2	U	234	239	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	226	231	first strand
Strand 2	W	234	239	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	76	first strand
Strand 2	C	83	87	anti-parallel
Strand 3	C	51	55	parallel
Strand 4	C	162	166	parallel
Strand 5	C	20	24	parallel
Strand 6	C	236	242	parallel
Strand 7	C	266	274	parallel
Strand 8	C	310	315	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5BWK

Analysis of interatomic Contacts of Structural Units in PDB entry:
5BWK